Solibacillus silvestris DSM 12223: SOLI23_02290
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Entry
SOLI23_02290 CDS
T04506
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssil
Solibacillus silvestris DSM 12223
Brite
KEGG Orthology (KO) [BR:
ssil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssil03400
]
SOLI23_02290
Enzymes [BR:
ssil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SOLI23_02290
DNA repair and recombination proteins [BR:
ssil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SOLI23_02290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
RTP
NTPase_1
AAA_22
AAA_30
AAA_16
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AMO84434
LinkDB
All DBs
Position
502527..506168
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AA seq
1213 aa
AA seq
DB search
MTLRVITGRAGTGKTTLIHREIVNELKTNIFGHPIFILVPDQMSFTTEYELTTNYDIEGM
MRAQVMTFKRLAWFVLQNEGGIAHERIDGTGYRMLLRRILEEHQEEFLLFKRAAGKPGFT
KEVEQILKEFSQYHIDLETIEPLIESLRLNGASEVLLHKLHDLNIILKQLHERIGTDYID
GDGYFPLLIERIPKMESLHNTDIYLDGFVSFNGQEFAILKELLIYAKSVTIVLPMEDPQM
DLLEGSVFYRAAMTYDKIKNELQKLRFERGIDIEEEPRVHLEVNYRATNRDLLHIEHCFD
KITDRPVESTGHTKILEGVNPRAEVQGIAQEIKQLVLEKGLRYKDIGIMYRQADVYDAII
GTTFTQYEIPFFSNEKRAMLYHPLIEFSRSVLEIITTNWKYEPIFRSIKTDLFFPYGANL
VAMRDRADILENFVIAKGIVHDRWMKEEVWHYRRFKSLEKVNAVQTEDELEHEQLLKSVR
DLIREPVLALQNRLKGKKTGREIVVALYEFMEQLDIYKKLLKMQEQEEQSASMHQSLEHE
QAWNGWIHILEQFDLMFGDKVMPLEEVAQILDEGFETLEFASVPPTLDEVTVSTVEFARF
DNKKAIFVIGVNDGVYPMRMEAGGLLSDDERETFEKIDVELAPGIKSRLLQESFLFYRAI
SSSTQYLYITYANADEESKSKLPSLYINRLHSMFEMTENSGTPDEKSVRTLPHRKIAMDP
LDEFQKDNVLNYMQHPSPAIGFLMTQLKQAQHERRPLTEEWAALKAFYEREQRWKDVLNV
VEKPLYTTNEAEPLTEEVATALYGEDFLASVSRIERFYSCPYSHFASYGLKLQERTEFKL
ETFAMGDLFHEAIRTILSEKEPSIPLTTYVACYKKADETISKLADYFSYSILKSSHRFEY
IKTKLVKIVARTIYALINQSELSKFKAIAHEKPFGKRDDKNTEQDDRNPLEALKIDLEHN
RKMYVRGQIDRIDAYKDAENLYLRVIDYKSSGRKLDFTEVYNGISLQLLTYLDVAMKNIP
IIAREGKFIQDLSELENIIVQAAGMFYLHVHNPLIPTEDYEQYERVESLRQEKFKLSGYM
VKDVEVAQLMDKSLEPSKTSIIVPAAFKSGENPEFNNRSSKVIEQDQMENLQEFVHYKFR
QAGNEIYRGNTEIKPYSLGNQKACTYCSFKSVCQFDQSETGNSYNEIKKQPEQEVFENIK
KVVCADDNSSEAE
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
gtgacgttacgagttataacaggacgggcaggcacggggaaaacgactttgatacaccgt
gaaatagtcaatgagttaaaaacaaatatatttggacatccaatttttatattagttcct
gaccaaatgtcgtttacaacggaatatgagctgacgacgaactatgacattgaaggaatg
atgcgtgcacaggttatgacattcaaacggctggcctggtttgtgctgcaaaatgaagga
ggtatcgcccacgaacgtattgacggcacagggtaccgcatgctgttacgacgtattttg
gaagaacatcaggaagagttcctattatttaaacgcgcggcaggtaaacccggttttacg
aaagaagtcgagcagattttaaaggaattcagccaatatcatatcgatttggaaacaatc
gagccattgatcgagtcattaagattaaacggggcaagtgaagtactgcttcataaatta
catgacctgaatattattttaaagcagctgcatgaacggatcgggacagattatattgat
ggcgatggttattttccgctgctaattgaacgtattccgaaaatggaaagcttgcacaat
accgatatttatctggacgggtttgtttcgtttaatggacaggaatttgccattttaaaa
gagctgcttatttatgcgaagagtgtcacaattgtgctcccgatggaagacccgcaaatg
gatctactggaaggctcggtattttacagagctgcgatgacgtatgacaaaataaagaat
gagctgcaaaagttacgattcgaacgaggaattgatattgaagaggagccgcgtgttcat
ttagaagtaaactaccgtgcaacaaatcgggacttgctccatattgaacattgcttcgac
aaaattactgatagaccagtcgaatcaacgggacacacgaaaatattggaaggtgtaaat
ccgcgcgcagaagtgcaaggtattgcccaggaaattaaacagctcgttctggagaagggg
ctgcgttataaagatatcgggattatgtaccgtcaggcagatgtatatgatgcgattatc
ggaacgacctttacacagtatgaaattccgtttttctcaaatgagaagcgggcaatgctt
tatcatccgcttatcgaatttagtcgatctgtactggaaattatcacaactaactggaaa
tacgaaccgattttcagaagtataaaaacagatctgttcttcccatatggagccaactta
gtcgcgatgagagacagagcggatattttggaaaacttcgtcattgcgaaagggattgtt
catgaccgttggatgaaagaggaagtatggcattaccgccgctttaaatcactggaaaaa
gtaaacgcggttcagacagaagacgagctggagcatgaacagcttttgaaatcggtacgc
gacttaatccgtgaaccggtactggcattgcagaaccggttgaaagggaaaaagacaggc
cgtgaaattgtcgttgcactgtatgaatttatggagcagcttgatatttataaaaagctg
ctaaaaatgcaggagcaggaagagcagtccgcgtcaatgcatcagtcattggagcatgag
caggcctggaatggctggattcatattctggagcagtttgaccttatgttcggcgataaa
gttatgccgttggaagaagttgcgcaaattttggatgaaggttttgaaacacttgaattt
gcaagtgtaccgccaacattggatgaagtgaccgtttcgactgtcgagtttgcacgattt
gataataaaaaggcgattttcgtaattggtgtcaatgatggggtgtacccgatgcgtatg
gaagcgggaggtctgctgtctgatgatgagcgtgaaacatttgaaaaaatcgatgtggaa
cttgcaccaggtataaaaagcaggctcctgcaggaaagcttcctcttttaccgggcaatt
tcttcatcgacacaatatttatatattacgtatgcaaatgcagatgaggaaagtaaaagc
aaactgccatcactttatattaaccgccttcacagcatgtttgaaatgacggaaaacagc
ggcacaccagatgaaaaatcggttcgtacactgccgcataggaaaattgcgatggacccg
cttgatgagttccaaaaagacaatgtgctcaattatatgcagcacccatcaccagcaatt
ggcttcttaatgacccagctgaagcaggcgcagcacgaacgacgtccacttaccgaagaa
tgggcagcattaaaagctttttacgaacgggaacagcgctggaaagatgtgctgaatgtc
gtggaaaaacctttatatacgacaaatgaagcggagcctctaacggaagaagtagcgaca
gcattgtatggcgaagatttcttggcgagtgtgtcgcgtatcgaacgcttttacagctgt
ccgtattcgcattttgcgtcctacgggctaaaactgcaggagcgtacagaattcaagcta
gaaacgttcgcgatgggcgatctgttccatgaggcgatccggacgattttatccgagaaa
gagccatcgattccgctcacaacatatgtagcgtgctataaaaaagcggatgagacgatt
tcaaaactggcggattatttctcttacagtattctgaagagcagccaccgtttcgaatat
attaaaacaaagcttgtgaaaattgttgcccgtacgatttatgcgctcattaatcaaagt
gagctgtcgaagtttaaagcgattgctcatgaaaagccatttgggaaacgagacgataaa
aatacggaacaggatgaccgcaatccgctggaagcactgaaaattgatttggagcataac
cggaaaatgtatgtacgcgggcaaattgaccggatcgatgcatataaagatgcggaaaac
ctgtatttgcgtgtcattgattataaatctagcggccgtaagctcgattttacagaagta
tataacgggatttcactgcagctgttgacgtatttggatgtagcgatgaaaaatatcccg
ataatcgcacgcgaaggaaagttcatccaggacttatcggagctggaaaatatcattgtc
caggcggcagggatgttctatctccatgtgcataatccgcttattccaacagaggactat
gagcagtatgagcgtgtggaaagtttacgtcaggagaagttcaagttaagcggctatatg
gtaaaagatgtggaagtggcacagttgatggacaagtcactcgagccgagtaaaacatcg
attattgtgccggcagcgtttaaaagcggcgagaatccggaatttaacaaccgttcatca
aaagtaatcgaacaggaccagatggaaaacctgcaggaatttgtacactataaattccgt
caggcgggcaatgagatttaccgcggaaatacggaaattaaaccgtacagcctagggaat
caaaaggcttgtacgtattgcagctttaaatcggtttgccagttcgaccagtcggaaacc
ggcaacagctataatgaaattaaaaaacagccggaacaggaagtattcgaaaatattaaa
aaggtggtatgtgcagatgacaattccagtgaagccgaatga
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