Solibacillus silvestris DSM 12223: SOLI23_02295
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Entry
SOLI23_02295 CDS
T04506
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ssil
Solibacillus silvestris DSM 12223
Brite
KEGG Orthology (KO) [BR:
ssil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssil03400
]
SOLI23_02295
Enzymes [BR:
ssil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SOLI23_02295
DNA repair and recombination proteins [BR:
ssil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SOLI23_02295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_16
AAA_12
Cullin_Nedd8
FANCI_S1-cap
Motif
Other DBs
NCBI-ProteinID:
AMO84435
LinkDB
All DBs
Position
506143..509862
Genome browser
AA seq
1239 aa
AA seq
DB search
MTIPVKPNDVQWTDVQWKAIYASGHDILVSAAAGSGKTAVLIERLIQKMLAPEDMRIDVD
ELLVVTFTNASAAEMRNRMAEALEKELAQNPNNQFLRRQLSLLNKAQISTLHSFCLSICR
EYAYTIDLDPGFRLASTEEASLLQDDVLMDVLEKAYRGDMEALFTKEELYTLIDSFASDR
SDQAIELLLQEMYKVSRVQPNPYEWLRALPEKYNIDPESPIDELVIAQEVRPFIIGSLRE
IATRLEKGLQIVSVTPALEKNKPLFEAEYTGVMHVLKAMEEGSWEQAYELIPAVEFGRIK
PLTKKDTEEDKQYYAVAKNHRDTAKEMLSDLKETFFARHPKLYVQEMAATKPILETLVKL
TIEYSEAFKKAKQERGLLDFSDLEHYALEILTDEESTSNPPLPSDVALNFQKRFKEVLVD
EYQDVNFLQETILQLVKNGGEQDGNMFMVGDVKQSIYAFRLAEPRLFLDKYKRFEEDPSG
TGMKIDLNANFRSRSEVLEGTNYVFEQIMDEEVGEIAYDEQAKLKFGASYDEQQVPIELV
LLEGDSKAQIIPGSEEGSEEESISSAQQEARYIIQRIRDLVDRGGQVYNPKTKSMRPVSY
RDIVVLMRSRTWYTTFAEEFKLAGLPLYAETDGGYFESLEVMIMINTLKVIDNPYQDIPL
ASVLRAPFIGLTENELAKIRLINGKVPFYEALKQYKEEAMGDMPIETEAKLDKFFTMHQK
WRQFSRHGALADLVWQVYLDTNYYEMVGAMANGKQRQANLRALHDRALSYEKSSFRGLFR
FLRFIDRISSRGDDLGIAKSTSEADDVVTLLTIHKSKGLEYPVVFVAGMSRTFNTKDLGS
RYIFDQDFGLAIKSVNPDLNIISTSLPHLYVKEKKLAKMKAEEMRVLYVAMTRAKERLIL
VGSIKDWEKQKEEWAFYQELEETVLPAYIRSKANSYLSWVGPAVARHNDFLFADYGYSNE
AATTEKWTVRIIPNRDYLLANEAETVEQEVVEQAVNEELVELLTKRFTTPYPYANAVTKK
SKTSVSEQKRLESLQQMEEEQLYNMEAKRYVKTDVPSFMLKGKKERKLSATEVGTAVHAV
MQHIPQQGFASIEEIKQYIQSLVERQLLQQIEADAVSAEKVFAFFETEIGGRFKKAKQVL
REEPFTLSLKNQEGDAQIIQGVIDCIFEDEHGNWVLLDYKTDYIEQYLLGDFEKIKQKMT
KSYQIQLNYYQHAVQSIKRIQISERILYLYSIGQEVKID
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgacaattccagtgaagccgaatgatgttcaatggacagatgtgcagtggaaagccatc
tatgcatccggtcatgacatattagtatctgcagcggccggttcgggaaaaacggccgta
ttgatcgagcgactgattcaaaagatgttagcgcctgaagacatgcgcattgatgtagat
gagctgctcgtcgtaacgtttacaaatgcctcggctgcggaaatgcgtaaccgtatggca
gaagcgcttgaaaaggagcttgcccaaaatccgaacaaccaatttcttcgccgtcagtta
agtttactgaacaaagcacaaatctctacattgcattcattctgtttatcgatttgccga
gaatatgcatacacgattgatctggacccgggtttccgtctggcaagtacggaggaagct
tcattattacaggatgatgtgttgatggatgtgcttgaaaaggcataccggggtgatatg
gaggcattgttcacgaaagaggagctttatacattaatcgacagctttgcgtctgatcgc
agtgaccaggcgattgagctgttgctgcaggaaatgtataaagtatcgcgcgtacagcca
aacccgtatgagtggctgcgtgcattgccggaaaaatataatattgatcctgaaagtcca
attgatgaactggtcattgcgcaggaagtccgcccgtttattatcgggagcctgagagaa
attgccactcgtcttgaaaaaggattgcaaattgtgtccgttacaccagcgttagagaaa
aataagccattgtttgaagctgaatatacaggggttatgcatgtactcaaggcaatggaa
gaaggttcatgggaacaggcatatgagctgattccagctgttgagttcggacggatcaag
ccattgacgaaaaaggataccgaggaagataaacaatattatgcggtagcgaaaaatcat
cgtgatacggcaaaagaaatgttgtctgatttaaaggaaacattttttgcacgccatcca
aagttgtatgtacaggaaatggcggcgacaaagcctattttggaaacgctcgtaaaactg
acgattgaatacagtgaagcgtttaaaaaggcgaagcaggagcgcggcctgcttgatttt
tcggatttggagcattatgcactggaaattttgacggatgaagaaagtacgtcaaatccc
cctctgccatctgatgtcgcattgaattttcagaagcgtttcaaagaagtgcttgtcgat
gagtatcaggacgtcaattttttgcaggaaacaattttacagcttgtgaaaaatggcggg
gagcaggacgggaatatgtttatggttggcgatgtaaagcagtctatctatgcgtttcgt
cttgcagagccacgtcttttcctagataaatataagcgatttgaagaagacccgtccgga
acaggaatgaaaattgacttgaatgccaatttccgtagtcgttcggaagtgcttgaaggt
acgaactatgtgtttgagcaaattatggatgaagaagtcggtgaaattgcatacgatgaa
caggcaaaactgaagttcggggcgagctatgatgaacagcaagtaccgattgaattagtt
ttactggaaggtgattcaaaagcgcaaatcattccgggaagtgaagagggttcagaggaa
gagagcatcagctcagcacagcaggaagcgcgttacattattcagcgcatccgagattta
gtcgatcgtggtggacaagtatacaatccgaaaacgaaatcgatgcggcctgtcagctac
cgcgatattgtcgtattgatgcgttcacgtacatggtatacgacgtttgcggaggaattc
aaattggccggcctgccgctatatgccgaaacggacggcggttattttgaatcgctagaa
gtcatgattatgattaacacgttaaaagtcatcgacaacccgtatcaggatattccgctg
gcgtctgtactgcgtgctccgtttatcgggttaactgaaaatgaactggcaaaaatccgt
ttaattaatggaaaagtacctttttatgaagcgttaaaacaatataaagaagaggcaatg
ggtgacatgccaattgaaactgaagctaagcttgataagttctttacgatgcatcagaaa
tggcgccagttttcccgtcatggggcattggctgatttagtatggcaagtgtatttagat
acgaattattatgaaatggtcggcgcgatggcgaacggcaagcagcgacaggcgaactta
cgggcactgcatgaccgtgcattaagctatgaaaaatcgtcattccgcggattattccgc
ttcctgcgttttatcgaccgcataagttcgcgcggagacgatttagggattgcgaaatca
acaagtgaagccgatgatgtcgtgacattgcttacaatccataaatcaaaagggcttgaa
tatccggtcgtgtttgtagcggggatgagccggactttcaatacaaaagacttaggcagc
cgctatattttcgatcaggatttcggtttggcgattaaatcggtcaatccggatttaaat
atcatttcgacctctttgccgcatttatatgtgaaggagaaaaagctggcgaaaatgaag
gcggaggaaatgcgtgttttatatgttgcgatgactcgtgcaaaggaacgacttatttta
gtcggctcgattaaagattgggagaagcagaaggaagaatgggcattttatcaggagctg
gaggagacggtgcttcctgcatacattcgttcaaaagcgaacagttatttaagctgggtt
ggtccggctgttgcccgacataatgatttcctgtttgccgattacggctattcaaatgaa
gcggcaacaacagaaaagtggacagtccgcattattccaaaccgcgactatttgcttgcc
aatgaagcggaaacggtggagcaggaagtggttgaacaggctgtgaatgaagagctggtg
gagctgctgacaaaacgttttacaacaccgtacccgtacgcaaatgcggtgacgaaaaaa
tcgaaaacgtcggtgtctgagcaaaagcgtcttgaaagtttgcagcaaatggaagaagag
cagctttacaatatggaagcgaagcgctacgtaaaaaccgatgtaccaagctttatgctg
aaagggaaaaaagaacgtaaactttcggcaaccgaagtcggtacagctgtccatgccgtt
atgcagcatatcccgcagcaaggatttgcatcaattgaagagataaaacagtatatccaa
tcactcgtagaacgtcagcttctgcagcaaatcgaagcagatgcggtttcggcggaaaag
gtatttgcctttttcgaaacagaaataggtgggcgttttaaaaaagcgaaacaagtgctg
cgtgaagaaccatttacacttagtttgaaaaatcaggaaggggacgcccaaattattcaa
ggtgtcatcgactgtatttttgaagatgaacatgggaactgggtgcttcttgattataaa
acggactatatcgaacaatatttattaggcgattttgagaaaattaaacaaaaaatgaca
aagtcgtaccaaattcaattaaactattatcagcatgctgtccaatcaattaagcgtatt
caaataagtgaacgcattttatatttatatagtattggacaagaagtgaaaatagattag
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