KEGG   Solibacillus silvestris DSM 12223: SOLI23_03980
Entry
SOLI23_03980      CDS       T04506                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
ssil  Solibacillus silvestris DSM 12223
Pathway
ssil03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SOLI23_03980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssil03019]
    SOLI23_03980
Messenger RNA biogenesis [BR:ssil03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SOLI23_03980
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_2 KH_KhpA-B
Other DBs
NCBI-ProteinID: AMO84768
LinkDB
Position
853160..854713
AA seq 517 aa
MEMILPALLGFAVGVAVIYFYMKNVNDSKVTGAKHVAEQIVEDAKREADALKKEALLEAK
DETHKFRTEAENDIRDRRGELQKQENRLLQREENLDRKDETLNKREISLERKEEALASRQ
QHIEQMESKVEQLVASQKTELERIAALTREEAKEVILKEVENELSTDIAVMTKESELRAK
EESDKKAREILSLALQRFAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGID
LIIDDTPEAVILSGFDPIRRETARLALEKLVQDGRIHPARIEEMVEKSRREVDEQIRETG
EQTTFEVGIHNLHPDLMKILGRMKYRTSYGQNVLKHSIEVAHLAGLLAAELGEDVTLARR
AGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEATSVIAVLVAAA
DALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSFAIQAGREVRIIVQPEKIDDLA
SHRLARDIRKRIEEELDYPGHIKVTVIRETRSVEYAK
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggaaatgatactccctgctttgctaggattcgctgtcggtgtcgctgttatctatttc
tacatgaaaaacgtgaatgattcaaaagtgactggtgcaaagcatgttgccgagcaaatc
gtggaagacgcgaaacgtgaagcggatgcactgaaaaaagaagcactgcttgaagcaaag
gatgaaactcacaaatttcgtactgaagcggaaaatgacattcgtgaccgtcgtggagaa
cttcagaaacaagagaaccgtttattgcaaagagaagaaaaccttgaccgcaaagatgaa
actctgaacaaaagagagataagcttagagcgtaaggaagaagctctggcaagcagacaa
cagcatattgaacagatggaaagcaaagtagaacaacttgttgcaagtcaaaaaactgag
cttgagcgcattgcagctctgacgcgcgaagaagcgaaagaggttatcttgaaggaagtt
gaaaacgaactttctacagatatcgctgtaatgacgaaagaatcagaattgcgtgcaaaa
gaagaatcagacaaaaaggctcgagaaattttatcacttgcattacaacgctttgcagct
gaccatgttgcagaaacaacagtgtccgttgtaaatctgccaaatgatgagatgaaaggc
cgcattatcggtcgtgaaggccgtaacatccgtacattagaaacgcttacaggtatcgat
ctgattattgatgatacgcctgaagcagttattttatccggctttgatccgattcgccgt
gaaacagctcgtcttgcattagaaaaactagttcaagatggtcgtattcacccggcacgt
atcgaagaaatggttgaaaagtctcgccgtgaagtggacgaacagatccgcgaaacaggt
gagcaaacaacatttgaagtaggtattcataacctgcatccggatttaatgaagatctta
ggtcgtatgaaataccgtacaagctatggtcaaaatgtattaaaacactcaatcgaagta
gcccacttagcaggattacttgctgctgaacttggcgaagatgtaacattagcgcgtcgt
gcaggtttactgcatgatatcggtaaagcgattgaccatgaagtagaaggaagccacgtt
gaaatcggtgtggaactggcaacgaagtataaagaacatccagttgtgattaactcgatt
gcatcccaccatggtgacacagaagcaacttcagttatcgctgtacttgtagcagcagct
gatgcattatcagcagcccgcccaggtgcccgcagtgaaactttagaaaactatattcgc
cgccttgaaaagctggaagaaatttcggaaagctatgacggcgttgaaaaatcattcgca
attcaagcaggtcgtgaagtacgtatcatcgtacagcctgaaaaaatcgatgatctggca
tcacatcgtttagcgcgagatatccgcaaacgcattgaagaagaactcgattatccaggt
cacatcaaagtgacggttattcgtgaaacacgctctgtggagtatgcgaaataa

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