Solibacillus silvestris DSM 12223: SOLI23_05970
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Entry
SOLI23_05970 CDS
T04506
Name
(GenBank) RNA polymerase subunit sigma
KO
K26992
RNA polymerase sigma-O factor
Organism
ssil
Solibacillus silvestris DSM 12223
Brite
KEGG Orthology (KO) [BR:
ssil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssil03021
]
SOLI23_05970
Transcription machinery [BR:
ssil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SOLI23_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
UPF0122
HTH_Tnp_4
Sigma70_ECF
Phage_antitermQ
MarR_2
ANAPC1
Cro
HTH_17
HTH_3
HTH_10
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AMO85147
LinkDB
All DBs
Position
1255927..1256478
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AA seq
183 aa
AA seq
DB search
MKILNPDVVNSNVFKRFLEIEKYNKLYNAYLQEPTNTNADSLNEQFKYFERQIIRIAYIK
KAIIYESRKFDSKLREHNRKHELNLDAPINEGLAMVDTVQDEKSFIQFENIFENDLESLL
SDELLITLLKRLNAKQKQVLYYRYVNELTEKEIAKIYNVSQQAISKMIHKSINILREGRE
GDD
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttaaatcctgatgtcgtgaatagtaatgtgtttaaacggtttttagagatt
gaaaaatataacaaactgtataatgcatacttacaggaaccgacaaatactaatgcggat
tctttaaatgaacaatttaaatattttgaaagacagatcatacgtatcgcctatatcaaa
aaagcaattatttacgaatccagaaaatttgattcaaagttaagagagcacaataggaag
catgaattgaatctggatgctccaataaatgaaggcctggcaatggttgacacagttcaa
gatgaaaaatcttttatacaattcgaaaacatttttgagaatgacttagagagcttgttg
agtgatgaactgttaataaccttattaaaacgtttaaatgctaagcaaaaacaggttttg
tattatcggtatgtaaacgagttaactgagaaggaaattgcgaagatttacaatgtatca
caacaagctatttctaagatgattcataaatcaattaatattttaagagaagggagggag
ggggatgattga
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