Solibacillus silvestris DSM 12223: SOLI23_12020
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Entry
SOLI23_12020 CDS
T04506
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
ssil
Solibacillus silvestris DSM 12223
Pathway
ssil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SOLI23_12020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssil03400
]
SOLI23_12020
DNA repair and recombination proteins [BR:
ssil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOLI23_12020
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
5_3_exonuc
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AMO86289
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Position
complement(2440684..2442474)
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AA seq
596 aa
AA seq
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MNAIIKAKLEILPNESGCYIMKDRQGTIIYVGKAKVLKNRVRSYFTGSHDGKTARLVSEI
EDFEYIVTSSDLEALILELNLIKLHDPKYNVKLTDDKTYPYIKITNERYPRIITTRKVKK
DKAKYFGPYPNAYAANETRKLLDRLYPLRKCTHLPNQVCLYYHLGQCLAPCVKDIEKQVY
DEMIDEISKFLNGGVEEIKQDLQQKMIDAAENLEFERAKEFRDLIAHIDQIMEKQKIVTD
DLSNRDVFGYAVEKGWMCVQVFFVRQGKLIERDVSIFPIYNEPEEEFLTFVGRFYEQPHH
LLPKEIFVPKSIDVTILQKLLDVKVVTPKRGSKKELVDLAMKNAEIAIHEKFQLIERQEE
RTVGACEALAEAMQIPLPLRIEAFDNSHMHGADPVSAMVVFIDGKPAKKEYRKYKTREAA
KHDDYGAMQEVIRRRYTRVLRENLPLPDLILIDGGKGQMEVAREVIEDELGLVIPIAGLA
KDEKHNTSQLLFGTPPEVVPLKRTSDGFYLLQRIQDEVHRFAITFLRQQHQTNAITSVLD
GIEGVGPKRKQQLMKHFGSVKKIREASELQLQESGVPAKLAEVIYRHFHEAPLNKE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaatcattaaagcaaaactagaaatattaccgaacgaatcaggttgctatatt
atgaaagaccgtcaaggcacaattatatacgtcggtaaggccaaagtattgaaaaatcga
gtgcgttcttactttacgggaagccatgacggcaaaacagcgagactagtaagtgagatt
gaagacttcgagtatattgtgacttcaagcgatttggaagcccttattctggaactgaat
ctaattaagctgcatgacccgaaatataatgtgaaattaacggatgataaaacgtatccc
tatataaaaattacgaacgaacgatacccgcgtattattacgacaagaaaagtgaagaag
gataaagcaaaatatttcggaccgtatccgaatgcctatgcagcaaacgaaacgcgaaaa
ttactggaccgtttgtatccgcttcgtaaatgtacacatctgcctaatcaagtatgcttg
tactatcatttagggcaatgtttggcaccgtgtgtaaaggacattgaaaaacaagtgtat
gacgaaatgatcgatgagatttcaaagtttttaaacggaggagtcgaagaaataaagcaa
gatcttcagcaaaaaatgatcgatgctgccgaaaatcttgagtttgagcgtgcgaaggaa
ttccgtgatttgatcgcccatatcgatcaaattatggaaaagcaaaaaattgtaacggat
gatttgagcaaccgagatgtatttggctatgcagtggaaaaaggctggatgtgtgtccag
gtattttttgtgcgtcaaggcaaactcattgagcgcgatgtatcgattttcccgatttat
aatgagccggaagaggaatttttaacatttgtcggccgtttttacgaacagccgcatcat
ttattaccaaaagaaatctttgttccgaaatcgattgacgtaacgattttacaaaagctg
ttggatgttaaagtagtgacaccgaagcgcggttcaaaaaaagagcttgttgatctagcg
atgaaaaatgcagaaatcgccattcacgagaagttccagttaattgaacgtcaagaggaa
cggacagtaggggcttgtgaagcacttgccgaagcgatgcaaattccattgccgttaaga
attgaagcatttgataatagtcatatgcatggagctgatccggtttcagcaatggttgtt
tttatagacgggaagcctgcgaaaaaggaataccggaaatataaaacaagagaagcggct
aaacatgatgactatggtgcgatgcaggaagttattcgacgacgctatacacgtgtattg
cgggaaaatctgccattgcctgatctcattctcatagacggaggaaaagggcaaatggaa
gttgcacgagaagtaattgaagacgaactggggttagtcattccaatagcggggctggca
aaagacgaaaagcacaatacgtcccagcttttatttggtacgccgccggaagttgttccg
ttaaagcgtacgagtgacggtttttatttattgcagcgcattcaagatgaggtacacaga
tttgcaatcacatttttacgtcagcagcatcagacaaatgcgattacttcggttcttgat
ggaattgaaggtgtaggtccgaagcgaaagcagcaacttatgaaacattttgggtccgta
aaaaaaattcgcgaggcaagcgagctgcaactgcaggagtccggtgttccggcaaaattg
gcggaagttatttatcgccattttcatgaagcaccattgaataaagaatag
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