Solibacillus silvestris DSM 12223: SOLI23_12390
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Entry
SOLI23_12390 CDS
T04506
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssil
Solibacillus silvestris DSM 12223
Pathway
ssil03030
DNA replication
ssil03430
Mismatch repair
ssil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOLI23_12390
03430 Mismatch repair
SOLI23_12390
03440 Homologous recombination
SOLI23_12390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssil03032
]
SOLI23_12390
03400 DNA repair and recombination proteins [BR:
ssil03400
]
SOLI23_12390
Enzymes [BR:
ssil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOLI23_12390
DNA replication proteins [BR:
ssil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SOLI23_12390
DNA repair and recombination proteins [BR:
ssil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SOLI23_12390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AMO86362
LinkDB
All DBs
Position
complement(2523385..2526459)
Genome browser
AA seq
1024 aa
AA seq
DB search
MTVYPQVRTSADLLKSTIRIEELIPFLHHQKAKSCAIVNTKLYGLLPFWFEMKRAGIHPV
VGLTIQLELTEEQSLPLVLYAKTNEGYRNLLKISSSIAIRPEQTIPLRWLLAYGKGIAFM
IPALEQQAIWLQQMAEPVLAEFMKAYPDEVYIGISRLSDTASLESSAVQLAKKNALPIVA
THESLFFNEEDFFAYEVAQAIHTGVKLNDAVQSNKQENHLLTAEQWQQKFHDQQQWLVQL
ENLLLSCQIELNTNNVYMPKFPVGEGETAENLLQQQVMTGLQRRLNTNTLPGHYVERMNY
ELHVIQSMGYSDYFLIVADFMQFAREAQILTGPGRGSSASSLVAFALEITQVDPLQYDLL
FERFLNPERITLPDIDIDFLDTRRHEVIQYVAKKYGKQYVAQIITFGTLSAKAVARDVAR
MFNFESEALEMISKLIPNKPGITLKEAYAMSENLRAWITAEPIRQKWFQTSLRLEGLPRN
ASTHAAGVVLSPVPLVDVVPIEEGHDGIFLTQWPMQEVEQNGLLKIDFLGLRNLTILEQI
RKSIQFTHNKQINFNHIPLNDEKTFELLQNGDTNGIFQLESDGMKNALREIKPTNFLDIV
AVNALYRPGPMEFIPMYARRKHKKEQVIMPHPHLTPILEETYGVIIYQEQIMRIANVMAG
FSFGQADLLRRAVSKKKRDVLEQQRASFVKGALTKGYTQQAAEEVYALIVRFADYGFPKS
HAVAYSVISYQMAYLKANYPVNFYAALLTNATGNPDKLAQILMEAKAKGIEILPPSINRS
MRHFKVESGKIRFSLSAIRGVPQPFMQKLLLAREERQKPFDSIFDLAVTLTTANFNRKII
EPLIKAGALDEFGKDRATLLATIEGAQKQADFVRPGGDDLFEGALLAFGKPKYSETSPIP
EKIKLQYEKDVLGFYLSDHPIVKLRSQFPEVTATVQTLAQLKDNAFVKMIGQVREMRQLR
TKRGELMAFVQMEDEYGTVSLTLFPKEYEQVVGKIREEGLLYIEGFYEHRFNKQQIKVKQ
IIIK
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
gtgactgtatatccgcaagtacggacaagtgccgatttattgaaaagtacaattcgtata
gaagagctcatcccttttttacatcatcaaaaggcaaaaagctgtgcaattgttaatacg
aaattgtacggacttttgcctttttggtttgaaatgaaaagggcaggtattcatccggta
gtaggcttgacaattcagcttgaattgacagaagaacaatcattaccgcttgttttatat
gcaaaaacaaatgaaggatatcgtaatttattgaaaatttccagcagtatcgccattcgt
ccggagcaaacgattccgttacgatggctgcttgcatatggcaaaggaattgcttttatg
attcccgcgctcgaacagcaggcaatatggttacagcaaatggcagagccagtattggca
gaattcatgaaggcttatccggatgaagtgtatatcgggatttcccgtttatccgacaca
gctagtttggagagttcggcagtccaactcgctaaaaaaaatgcactcccaattgttgct
acacatgaaagtctgttttttaatgaagaggacttctttgcctatgaagtggcacaagcc
attcataccggtgtaaaactgaatgatgctgttcagagtaataaacaggaaaatcattta
ctgacagccgaacaatggcagcaaaaatttcatgatcagcaacaatggctcgtacaattg
gaaaatttattattaagctgtcaaattgaactaaacacaaataatgtttatatgccgaag
tttccggttggagaaggggagacggcggaaaacttgctgcagcagcaagtaatgactggt
ttacagcgacgtttaaatacgaatacattgcctggtcattatgttgaacggatgaactat
gagcttcatgttattcagtcgatgggctactcagattattttctgattgttgccgacttt
atgcagtttgctcgtgaagctcaaatattaacaggtcctggccgtggttcttccgcatct
tcacttgttgcatttgcactcgagattacacaggtagatccattgcaatacgatttgctg
tttgaacgttttttaaatccggaacgtattacattgccggatatcgatatcgacttttta
gatacgagacggcatgaagtcattcagtatgtggcgaaaaaatacggcaaacagtatgtc
gcgcaaattattacgttcggtacattatcagccaaggcggttgcccgagatgtagctcgt
atgttcaattttgaaagtgaagcattggaaatgatttcaaagcttattccaaataaacct
ggcattacattgaaggaagcatatgcaatgtcggaaaacttgagagcatggattacagcg
gagcctatccgtcaaaagtggtttcaaacatctctgcgattggaaggtcttccaaggaat
gcgtcaacacacgcagcgggggttgtattgagtcctgttccattagtcgatgtcgtgcca
attgaagaaggacatgacgggatatttttaacacagtggcctatgcaagaagtggagcaa
aacgggctgttgaaaattgactttttagggctccgaaatttaacgattttagagcaaatc
cggaaatcgattcagtttacccataataaacaaattaattttaatcacattccgctcaat
gatgaaaaaacatttgagcttttacaaaatggcgacactaatggcattttccagcttgag
tcggacggtatgaaaaatgcactacgtgaaattaaaccgaccaactttttagatattgtt
gcggtcaatgcattgtatcgaccgggcccaatggaatttatcccgatgtacgcaagaaga
aagcataaaaaagagcaggtaattatgcctcatccgcatttaacaccgattttggaagag
acatacggcgttattatttatcaggaacaaattatgcgaattgcaaatgtgatggctggc
ttttcttttggacaggctgatttgctgcgtcgtgctgtgagtaaaaagaaacgtgacgtg
ttggagcagcagcgagcttctttcgtaaaaggagccttaacaaaaggctatacacagcag
gcagccgaagaagtatatgcattaattgtacgttttgctgattatggtttcccgaaaagc
catgccgttgcctatagtgttatttcttatcaaatggcgtacttaaaagccaattatcct
gtgaatttttatgctgcccttttgacaaatgcaacaggcaacccggacaagcttgctcaa
attttaatggaggcaaaagcaaagggaatcgaaattttaccaccatcgattaatcgaagt
atgcgtcactttaaagtggaaagcgggaaaatccgatttagtttgtcagccattagaggt
gtaccgcagccttttatgcaaaaactgttacttgcacgtgaagaaagacaaaagccgttt
gattctatttttgatttggcggtgacgttgacgacagcaaatttcaacaggaaaattatc
gaaccgctcattaaagcaggtgcacttgatgaattcgggaaagatcgtgccacactactt
gccactattgaaggcgcgcaaaaacaggctgattttgtacgtccaggcggggatgacttg
tttgaaggggcattactggcatttggcaaaccgaaatatagtgaaacatcgccaataccg
gaaaaaattaagctgcaatacgaaaaggatgtgctcggtttttatttatcggaccatcca
attgtaaaattacgaagtcaattccctgaagtaactgcaactgttcaaacattggcgcaa
cttaaagacaatgcatttgtaaaaatgatcggtcaagtcagggaaatgcgccagctccgc
acaaagcgcggtgaattgatggcatttgtacaaatggaagatgagtatggaacagtatcc
ttaaccttgttcccgaaagaatatgaacaagttgtcgggaaaatccgagaagaaggattg
ctttatatagagggcttttacgagcaccgatttaataaacaacaaataaaagttaaacag
attattataaaataa
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