Solibacillus silvestris DSM 12223: SOLI23_16095
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Entry
SOLI23_16095 CDS
T04506
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ssil
Solibacillus silvestris DSM 12223
Brite
KEGG Orthology (KO) [BR:
ssil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssil03009
]
SOLI23_16095
Enzymes [BR:
ssil01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SOLI23_16095
Ribosome biogenesis [BR:
ssil03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SOLI23_16095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
PrmA
Cons_hypoth95
TRM5-TYW2_MTfase
TPMT
Methyltransf_11
Methyltransf_15
Methyltransf_32
RrnaAD
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AMO87019
LinkDB
All DBs
Position
complement(3261564..3262928)
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AA seq
454 aa
AA seq
DB search
MSAPIKKNDRQTVYIEDLTHDGNGVAKIDGYPLFIQGALPGETAEIHVMKTLKNYGFAKV
VNILEKSPDRVEAPCVYFSQCGGCQLQHLSYEGQLKWKQNMVANVMKRLGKIDAPVHPVK
GMEEPWHYRNKSQIPFAQNESGQMVAGFYKTKSHSIVDMERCLIQTGEADVVMADLKREL
EILGVRPYDEKSHQGMLRHVVVRKGRATGEVMVVLVTKSKKFPQASAVIEKIRALIPNVT
SIVQNVNGEKTNVIFGNDTFTLWGKDTIEDTIGNVRFEISARSFYQVNPVQTEVLYKQAL
DYAQLTGNERVIDAYCGIGSISLFLAQKAGHVMGVEIVEQAIEDAKRNAALNGFTNTYFE
AGPAEEVIPRWYKEGKEADVLVVDPPRKGCDEALLSTIIEQKPKRVVYVSCNPATLARDL
RILEDGGYKTQEVQPVDMFPHTTHCEAVAWLELV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacctattaaaaaaaatgatcgtcaaacagtttatatagaagatttaacacat
gatggcaatggcgtcgcgaaaatcgatggctatccattattcatacaaggggcacttcct
ggagaaactgccgagatccatgtaatgaaaacattaaagaattatgggtttgcaaaagta
gtgaatatactggaaaagtcgcctgatcgtgtagaagcgccatgtgtctatttttcacaa
tgtgggggatgtcaattacagcatctttcgtatgagggacaattaaaatggaaacaaaat
atggtcgcaaatgtgatgaagcgtcttggtaaaatcgacgcacctgtccatccggtaaaa
ggaatggaagagccttggcattaccggaacaaatcacaaataccttttgcgcaaaacgaa
tcaggtcagatggtggcaggcttctataaaacgaagtcacactcaatcgttgatatggaa
cggtgtttaattcaaacaggggaagccgatgttgtcatggcagacttgaaacgtgagttg
gaaattttaggtgtgcgtccgtatgatgaaaaatcccatcaaggcatgctgcgtcatgtt
gtcgttcgtaaaggtcgcgcaacaggcgaagtaatggtcgtactcgttacaaaatctaag
aaattcccgcaggcgagtgcggtaatcgaaaaaatccgagcgcttatcccaaatgtcacg
tccattgtccaaaatgtaaacggcgagaaaacaaacgttatattcggcaatgacacattc
acactttggggcaaggatacaattgaagatacaatcggcaatgtccgttttgaaatttcg
gcacgctcgttttatcaagtcaacccggttcaaacagaagtgctttataaacaggccctc
gattatgcacaactgacaggcaatgaacgcgtaatcgatgcttattgcggtatcggatcc
atttcactgtttttagcccaaaaagcgggtcatgtaatgggtgttgaaatagtcgagcag
gcaatcgaagacgcaaaacgcaatgccgcattaaacggttttacaaacacatatttcgaa
gctggcccggcagaggaagtcattccccgctggtacaaagaaggtaaggaagcagatgta
ttagtagtcgatccgccgcgtaaaggctgtgatgaagcgttattgagtacaatcatcgag
caaaaaccgaagcgtgtagtttacgtatcgtgcaatcccgcaacccttgcgcgcgacctc
cgtattttagaagacggcggatataaaacgcaggaagtacagccggtcgatatgttcccg
cacacgacacactgtgaagcggttgcttggttggagttagtatag
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