Solibacillus silvestris DSM 12223: SOLI23_16290
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Entry
SOLI23_16290 CDS
T04506
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssil
Solibacillus silvestris DSM 12223
Pathway
ssil03420
Nucleotide excision repair
ssil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SOLI23_16290
03430 Mismatch repair
SOLI23_16290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssil03400
]
SOLI23_16290
Enzymes [BR:
ssil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SOLI23_16290
DNA repair and recombination proteins [BR:
ssil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOLI23_16290
MMR (mismatch excision repair)
Other MMR factors
SOLI23_16290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_11
Terminase_6N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMO87058
LinkDB
All DBs
Position
complement(3307610..3309868)
Genome browser
AA seq
752 aa
AA seq
DB search
MEHIAKNLVAGMNPQQAEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVVEREVYPSKIL
AITFTNKAAREMRERIDGILGNGTTESMWVSTFHSMCVRILRRNIDRIGYSKSFSILDSS
DQLTVIKNILKQDNIDPKKYDPRAILNTISSAKNECITVDGFEENMNPHNPFEKIVAQVY
KGYQKRLRQNQSLDFDDLIMLTIRLFKEAPDVLEFYQNKFQYIHVDEYQDTNKSQYLLVQ
LLAKKFRNICVVGDSDQSIYRWRGADISNILSFEKDYKEAKVIMLEQNYRSTKRILQAAN
SVIEKNKDRYKKVLRTENPEGEMIQLYKAGNEQDEAQYVVRTIQKLMKDEDYKLDDFAIL
YRTNAQSRVMEDVLVKSNMNYQIVGGTKFYDRKEIKDLLAYLRLIANNDDDLSLARIINE
PKRAIGATSFDKMLVYAMERDRSIFDAMGELVFMGLSGKAATSAENFYNMIRSLSDRQQE
LSVTEIVEEVLEKSGYRQMLKAEKSIEAESRLENIEEFLTVTQAFEARSEDQSLVAFLTD
LALIADIDSLDEEEKAKGTIILMTMHAAKGLEFPVVFIIGMEENIFPHSRSLESEDEMAE
ERRLMYVGATRAEQRLYLSCAGSRTIFGRTGYNAPSRFLREIDENVLEQVSKANTTSYRD
DSLPFKSNRYDRMPKRSLGSVQAPASQTSRLNSTGGDKFDWKVGDKAAHGKWGVGMVVSV
KGEGDGMELDIAFPSPTGIKRLLAKFAPITKA
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggagcatatagcaaaaaatttagtagcgggaatgaatccacagcaagctgaagcggtg
aaaacaacagaaggcccgctcctaattatggcaggggccggctctgggaaaacaagggta
ctgactcaccgtatcgcctatttagtcgttgagcgtgaagtatacccttcaaaaattttg
gccattacatttacaaataaagctgcccgtgaaatgcgtgagagaattgacgggatttta
ggaaacgggacaacggaaagcatgtgggtatccacattccactcaatgtgtgtacgcatt
ttgcgacgcaatattgaccggatcggctattcgaaaagcttctcaattttagatagttca
gatcagctgacggttataaaaaatatattgaagcaggataatatagatcctaaaaaatat
gacccgcgtgcaatcttaaacacgatcagttctgcaaaaaacgagtgcattactgtggat
gggtttgaagagaatatgaatccgcataatccttttgaaaagattgtcgcacaagtatat
aaaggctatcagaaacgattaagacaaaatcaaagtctcgattttgacgatttaattatg
ctgacaatccgtctatttaaagaagcgccggatgtgcttgagttttatcaaaacaaattc
cagtacattcatgttgatgagtatcaagatacgaacaaatctcaatatttgctcgtgcaa
ttattggcgaagaaattccgtaatatttgtgttgtcggggattcggaccaatcgatctat
cgttggcgaggtgctgatatttcgaatatattatcattcgaaaaagattacaaagaagca
aaggtgattatgcttgagcaaaactaccgttccacaaaacgtattttacaagcggcaaac
agcgtaattgaaaagaataaagaccgctataaaaaagtactgagaacagaaaatccggaa
ggcgaaatgatccagctttacaaagcgggaaatgagcaggatgaagcacaatatgttgta
cgtacgattcaaaaactcatgaaggatgaagattacaagctggatgattttgcgatttta
taccgtacaaacgcacagtcacgtgtgatggaggatgtgctcgtaaaatcgaatatgaac
taccagattgttggcggtacaaagttctatgatcgaaaagaaattaaagacttactcgct
tacttacgtttaattgcaaacaatgatgatgacctgtcattggcgagaattatcaatgaa
ccaaaacgtgcgattggtgcgacttcatttgataaaatgcttgtctatgcaatggagcgc
gaccgatcaatctttgatgcgatgggtgagcttgtatttatggggctttcaggcaaagca
gccacttcagctgaaaatttctacaatatgattcgttcattgagtgatcgtcagcaggaa
ttatcggttacagagattgtggaagaagtgcttgaaaaatcaggataccgccaaatgctg
aaagcggaaaagtcgattgaagcagaaagccgcttggaaaatatcgaagaatttttaaca
gtaacacaggcttttgaagcgcgcagtgaagaccagtcattagtagcgtttttaacggac
ctggcacttattgcagatattgattctttagatgaagaagaaaaagcgaaaggtacgatt
attttaatgacgatgcatgccgcaaaagggctggagttccctgttgtgttcattatcggg
atggaggaaaatatattcccgcattcacgttcattggaaagtgaagatgaaatggccgaa
gaacggcgcttgatgtatgtcggcgcaactcgggcagagcagcgtctatacttgtcttgt
gcgggttctcgtacaatttttggtcgtacaggatacaatgccccatcacgttttttacgc
gaaattgatgaaaatgtgttagagcaagtttcaaaagcaaatactacatcatatcgtgat
gattcactgccatttaaatcgaaccgttatgaccgtatgccgaagcgttcattaggaagc
gtgcaggcacctgcttcccaaacatcacgacttaattctacaggcggggataagtttgac
tggaaagtaggcgacaaagcagcccatggtaaatggggcgtcggtatggtcgtaagtgta
aaaggtgaaggggatggcatggaactggatatcgctttcccatcaccgactggaataaaa
cgtctgctagcgaaatttgcaccgattacgaaagcttag
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