Solibacillus silvestris DSM 12223: SOLI23_16695
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Entry
SOLI23_16695 CDS
T04506
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ssil
Solibacillus silvestris DSM 12223
Brite
KEGG Orthology (KO) [BR:
ssil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssil03021
]
SOLI23_16695
Transcription machinery [BR:
ssil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SOLI23_16695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_37
DUF134
DUF1492
TnsD
HTH_28
KORA
PhyR_sigma-like
HTH_3
Sigma70_ECF
HTH_50
GerE
HTH_1
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AMO87122
LinkDB
All DBs
Position
complement(3395341..3396126)
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AA seq
261 aa
AA seq
DB search
MSKESLPKNTSKEEVLNWIAEYQASGCEESQTNLVLHYQQLVESIARKYSHGKSYYDDIV
QVGMLGLLGAIRRFDPSFGRSFEAFAVPTIVGEIKRFLRDKTWDVHVPRRIKELGPRIKA
AVEALTTSLQRSPSITEIATYLEVQDEDVLEAMEMGRSYQALSMDHSIESDSDGSTVTLF
DVVGREDTGYEVTNRRMIVADAMNVLNERERQIIQLTYLEQLSQKEAGERLGISQMHVSR
IQRKAIKKLQDAITASGGVSL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaatcactacctaaaaatacatcaaaagaagaagtgctaaattggattgca
gaatatcaggcgagcggctgtgaagaatcacaaactaaccttgtgctccattatcagcag
ttagtcgagtcgattgcacgcaaatattcacatggtaaatcttattatgatgatattgta
caagtagggatgcttggtttattaggtgcgatccgacgatttgacccttcttttggcaga
agtttcgaggcgtttgctgttccgacaatcgtaggtgaaataaaacgttttttacgtgat
aaaacttgggacgtgcatgttccgagacgtattaaagaattgggacctagaatcaaggcg
gctgtcgaagcattaacgacgtccttacaacgttccccatccattactgaaattgcgaca
tatttagaagtacaggatgaggacgtattggaagcgatggagatgggacgaagctatcag
gcactatccatggatcattcaatcgaatcagattctgatggcagtacggtaacgttattt
gatgtagtgggtcgagaagatacaggctatgaagtgacaaaccgcagaatgattgtagct
gatgcgatgaatgtattaaatgaacgtgagcgacaaattatccagttaacatatttggaa
cagcttagtcaaaaggaagccggggagagactcggtatatcccaaatgcacgtttcgcga
attcaacgtaaagccattaaaaaattacaagatgccatcacagcaagcggcggcgtctcg
ttataa
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