Staphylococcus simiae: SAMEA4384339_0109
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Entry
SAMEA4384339_0109 CDS
T06955
Symbol
degA
Name
(GenBank) transcriptional repressor of ribose operon
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ssim
Staphylococcus simiae
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssim03000
]
SAMEA4384339_0109 (degA)
Transcription factors [BR:
ssim03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SAMEA4384339_0109 (degA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_38
HTH_24
Xre-like-HTH
HTH_23
HTH_7
HTH_11
HTH_28
Trp_repressor
HTH_17
Sigma70_r4_2
MarR
HTH_Tnp_ISL3
HTH_26
HTH_36
MarR_2
UPF0122
HTH_Crp_2
TnsD
Phage_int_SAM_2
MerR
Sigma70_r4
HTH_IclR
AntA
HTH_5
Motif
Other DBs
NCBI-ProteinID:
SNV55239
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All DBs
Position
1:124147..125148
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AA seq
333 aa
AA seq
DB search
MAKKNLSIKEIAEISGVSVATVSRVINQNGRFSKETEEKVLNVIKENNYKTNLIAKSLRV
RQTNTIGIIVPDIKNEFFATIVSEIEEYFFEKENFTVFICNTNSDKEKELDYLASLDAKG
VDGLIYISGYDDTLYTSVRRDIPIVCIDRKPKKSKDIVIVESDNFDGGFKATNFLLEGGC
KNIVVVKGEQEISTSVDRFNGYVEALKMKNVELDEKLIINLKKTHFSESRKAIQHLINSN
ISFDGIFALNDWLALGALYALKDNNINVPKDVKIIGFDNVSIGKYSYPSITTVNQDKRKM
GYVAAEKLVKLMRKSLKDNHIILPVSIINRETT
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtggctaagaaaaatttgtctattaaagaaattgctgaaatcagtggagtgtcagtagca
actgtttcaagagtaattaatcaaaatggtagattttcaaaagaaacagaggaaaaagtt
ttaaatgttatcaaagaaaataattataaaacaaatttaattgctaaaagcttaagagtt
cgtcaaactaatacaataggtataattgttccagatattaaaaatgaattttttgctaca
attgtttctgaaatagaagaatatttttttgaaaaggaaaattttacagtttttatctgt
aataccaatagtgataaagaaaaagaactggattatttagcaagtttggatgctaaaggt
gttgatggattaatatatatatcaggttatgatgacacattatacacttcagtgagaaga
gatataccaattgtttgtattgatagaaaacctaaaaaatctaaagatattgtaattgtt
gaatctgacaattttgatggtggttttaaagctacgaattttcttttggaaggtggatgt
aaaaatatagtagtagttaaaggtgaacaagaaatttctacaagtgtagatagatttaat
ggctatgtagaagcattaaaaatgaagaatgttgaattagatgagaaattaataataaat
cttaaaaaaactcatttttcagaatcacgaaaagctattcagcatctaattaatagtaat
atctcatttgatggaatctttgctttgaatgattggttagctctaggagcattatatgca
ttaaaagataataatataaatgtacctaaagatgttaaaattattggttttgataacgtg
tctattggtaaatatagctatccaagtattactacagttaatcaggataaaagaaaaatg
ggatatgttgctgctgaaaaattagttaaattgatgcgaaaatctttaaaagacaatcat
attattttacctgtgagcattattaatagagaaactacttaa
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