Staphylococcus simiae: SAMEA4384339_0774
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Entry
SAMEA4384339_0774 CDS
T06955
Symbol
csd
Name
(GenBank) Selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
ssim
Staphylococcus simiae
Pathway
ssim00450
Selenocompound metabolism
ssim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SAMEA4384339_0774 (csd)
Enzymes [BR:
ssim01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SAMEA4384339_0774 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SAMEA4384339_0774 (csd)
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GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Pyridoxal_deC
SelA
DUF5779
Motif
Other DBs
NCBI-ProteinID:
SNV65585
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All DBs
Position
1:838929..840170
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AA seq
413 aa
AA seq
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MTEQSFDVNEVMKDFPILDQQVNGKRLAYLDSTATSQTPVQVLDVLDDYYKRYNSNVHRG
VHTLGSLATDAYEGARETVRRFINAKYFEEIIFTRGTTASINIVARSYGDANVSEGDEIV
VTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDVKATINDKTKIVAIAHVSNVL
GTINDVKTIAEIAHEHGAIISVDGAQAAPHMALDMQDMDADFYSFSGHKMLGPTGIGVLF
GKRHLLQDMEPVEYGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLGEAIRYLDKLG
LDAIHQHEQQLTEYAYEQMSTIEGLEIYGPPKDRRAAVITFNLQDIHPHDVATAVDTEGV
AVRAGHHCAQPLMKWLDVSSTARASFYIYNTKEDIDQLVNALKQTKEFFSYEF
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaacaatcatttgatgtaaatgaagtgatgaaagactttccaatattagaccaa
caagtcaatgggaaacgcttagcttatttagattcaactgctacgagtcaaacgcctgtt
caggtgttagatgtactagatgattattataaacgctacaattcgaatgtacatcgtggt
gttcatacgttaggttcattggcaacagatgcatatgaaggtgctcgagaaacagtgcga
cgcttcattaatgccaaatattttgaagaaatcatttttactagaggtacaacagcttct
attaatatcgtggcacgtagttatggtgatgctaatgtcagtgaaggtgacgaaattgta
gttactgagatggaacatcatgctaatattgttccttggcaacaattagccaaacgtaaa
aatgctactttgaaatttattccaatgactgcagatggtgaactaaatattgaagatgtt
aaagcaacaataaatgataaaactaaaatagttgctattgctcatgtatctaatgtttta
ggaacgataaatgatgttaaaactattgctgaaattgcacatgaacatggtgctattatc
agtgtcgatggtgcacaagctgcgccacatatggcactagatatgcaagatatggatgca
gatttttatagttttagcggccataaaatgttaggaccaactggtattggtgtgttattt
gggaaacgtcacttattgcaagacatggaaccagtagaatatggtggagatatgatagat
tttgttagtaaatatgatgcaacatgggcagatttaccaactaaatttgaagcaggtaca
ccactaattgctcaagcaattggcttaggagaagcaatacgttaccttgataaattaggt
cttgatgcaattcatcagcacgaacaacaattgactgagtatgcgtatgaacaaatgtca
acaattgaaggtctagaaatttatggtcctccaaaagatcgtcgtgcagctgtcatcaca
tttaatttacaagatattcatccacatgatgtagcaacagctgttgatactgaaggtgtt
gctgtgcgtgctggacatcactgtgcgcaaccattaatgaaatggttagacgtatcttct
acagcaagagctagtttttatatatacaacacaaaagaagacattgatcagttagttaat
gccttgaaacaaacgaaggagtttttctcttatgaattttaa
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