Staphylococcus simiae: SAMEA4384339_0824
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Entry
SAMEA4384339_0824 CDS
T06955
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB, AddB subunit
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssim
Staphylococcus simiae
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssim03400
]
SAMEA4384339_0824 (addB)
Enzymes [BR:
ssim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4384339_0824 (addB)
DNA repair and recombination proteins [BR:
ssim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SAMEA4384339_0824 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_30
DUF484
Motif
Other DBs
NCBI-ProteinID:
SNV66168
LinkDB
All DBs
Position
1:888833..892300
Genome browser
AA seq
1155 aa
AA seq
DB search
MAMKAYLGRAGTGKSTQMLSEIKEKMQQQPLGDPIILIAPTQSTFQLEQAFVNDKQLNGS
LRTEVLHFERLSHRIFQEVGSYSEQKLSKAATEMMIYNIVQEQQQQLKLYRSQAGYYGFS
EKLAEQIQDFKKYTVTPDHLQQFLENNTVQTRTKHKLQDIELIYRKFEERLANDYITGED
ALQLFIAKIADSQWITKADIYIDGFHNFSTIEYQIIKELVKHARNVTVLLTTDGNEDQFS
LFRKPSEVLRHLEEIANDLHITLEKRYFNEVYRFNNNDLRHLEQQFDALQINPTTIQGHL
QILESSTMREEINEIARRIIADVRDNHIRFQDIAILYRDDSYAYLFESILPLYDIPFNID
TKRSMTHHPVMEMIRSLIEVIESKWHINPMLRLFKTDVLTAKVKHSDYLIDLLENFVLER
GIYGQRWLDEDLFHVEQFRKMGRKEHQLTDEERQEFEQVVKLKNDVIDKIMYFEQQMSQA
TTVRDFATAFYESMEYFELPNQLMTERDELDASGKHEAAEEIDQIWNGLLGILDDLVTVF
DTEEITLQRFLEVFDIGLEQLEFVMIPQTLDQVSIGTMDLAKVDNKQHVYLVGMNDGIMP
QPISASSLITDDEKKMFEQQAQVELSPTSDILQMDEAFVCYIAMTRARQQVTLSYSLMGN
SGDDKEISPFLEQIRALFSDFKIVNIHQLHEVAPLSLMQHTKQTKITLFESLRAWLDEEI
VADSWLDAYQVIRDNHHLNSGLNYLMSALTFENDTVQLGQKLSEDLYGKTINASVSRFEG
YMQCPFKHYASHGLRLNERTKYELQNFDLGDIFHSVLKYISERINGDFKHLDMYKIRQLT
SEALEDILPKVQFNLLNSSAYYRYLSRRIGVIVETTLSALKYQGTYSKFMPKYFETSFRR
QPRSEEELVAQTLTTTQGIPINIRGQIDRIDTYSKNDKSFVNIIDYKSSAGSATLDLTKV
YYGLQMQMMTYMDIVLQNHKRLGLTEEVKPGGLLYFHVHEPRIKFKSWADIDEEILEQQL
IKNFKLSGLVNSDREVIEALDTRLEPKFTSDIVPVGLTKDGSITKKGSQVADEATIYKFI
QHNKDNFIDTASNIMDGHTEVAPLKYKQTLPCQFCSYQSVCHVDGMIDSKRYRTVDESIN
PIEAIQDIELDGGDN
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaaagcatatcttggtcgagctggtacgggcaaatcgacacaaatgttatct
gaaattaaagaaaaaatgcaacaacaacctctaggtgatccaatcatattaattgcacct
acacaaagcacgtttcaattagaacaagcctttgttaatgataaacaattaaatggaagt
ctaagaacagaagttttacactttgaacgtttgagccatcgaatttttcaagaagtaggt
agctatagtgaacaaaaattatctaaagcagctactgaaatgatgatttacaatattgtt
caagaacaacagcaacagttgaaattatatcgctcacaagctggttactatggatttagt
gaaaagttagctgaacaaattcaagattttaaaaaatatactgtcactccagatcattta
caacaatttttagaaaataatacagtgcaaacacggacgaagcataaactgcaagatatt
gaattaatttatcgtaagtttgaagagcgtttagctaatgactatattactggtgaagat
gccttacaattatttattgctaaaatcgctgattcacaatggatcacaaaagcagatata
tatatagatggatttcataacttttccacgattgaatatcaaatcatcaaagaattagta
aagcatgcacgaaatgtcactgtgttacttacaacagatggtaatgaagatcaatttagt
ttatttagaaaaccgtctgaagtattacgccatttagaagaaattgctaatgatttacat
ataactttagaaaaaagatactttaacgaagtgtatcgctttaacaataatgatttaaga
catcttgaacaacaattcgatgccttacaaatcaatcccactacaatacagggtcatctt
caaattttagaatcatccactatgagagaagaaattaatgaaatcgcacgtcgcattatc
gcagatgtaagagataatcacattagatttcaagatattgcaattttatatcgtgacgac
agttatgcttatttatttgaatccattttaccgttatatgatattccatttaacatcgat
actaaacggtcaatgacgcatcatcctgttatggaaatgatacgttcattgattgaagta
atagagtctaaatggcatattaatccaatgttacggttatttaaaacagatgtcttaact
gcaaaagttaaacatagtgactatttgattgatttacttgaaaattttgttcttgaacga
ggtatctatggtcagcgttggttagatgaagatttatttcatgtagagcaatttagaaaa
atgggacgtaaagaacatcaattaactgacgaggaacgacaagaatttgaacaagttgtt
aaattaaaaaatgatgttatcgataaaatcatgtattttgaacaacaaatgtcacaagca
acaacagtacgtgactttgcaacagctttttatgaaagcatggaatattttgaattaccc
aatcaacttatgactgaacgagatgaattagatgcaagtggtaaacatgaagcagctgaa
gaaattgaccagatttggaatggacttcttggaatattagatgatttagtcactgtattt
gatacagaggaaataactttgcaaagatttttagaagtatttgatattggtctagaacaa
ttggaatttgtaatgattcctcaaacgctggatcaagttagtattggaacgatggattta
gctaaagtagacaataaacagcatgtctatctagtaggtatgaatgacggtataatgcca
caaccgatttctgcatctagtttaattactgatgatgaaaagaaaatgtttgaacaacaa
gctcaagttgaattgagtcctacatcagatatattacaaatggacgaagcttttgtatgt
tatattgcgatgactagagcaagacaacaagtgacattgtcatatagtttaatgggcaat
agcggagatgataaagaaatcagtccatttttagaacaaattagagcattatttagtgac
tttaaaattgtgaatattcatcaactgcacgaagttgctccgttatcattaatgcaacat
acgaaacaaacgaagattacgttatttgaatccttaagagcttggctcgatgaagaaata
gtggcagatagttggttagacgcttaccaagttatacgtgataatcatcatttaaacagc
ggtttaaattatttaatgtcggcgctaacttttgaaaatgacaccgtgcaattaggacaa
aaactgtctgaagatttatatggtaaaacaataaacgccagcgtatctcgctttgaagga
tatatgcaatgtccatttaagcattatgcttcgcatggtttacgtcttaatgaacgcaca
aaatatgaattgcaaaattttgatttaggagatattttccattcagtattgaaatatatc
tcagaacgtattaatggtgattttaagcatttggatatgtataagattagacaattaaca
tctgaagcacttgaagacattctacctaaagtacaatttaatctattaaattcttcagca
tattatcgctatctgtcacgtagaataggggtcattgtcgaaacaacacttagtgcactg
aagtatcaaggaacgtattcaaaatttatgcctaaatattttgaaactagttttagacgt
caaccaagatcagaggaagaattagtagcacaaacgttaacaacgactcaaggtattcct
atcaatataagaggacaaattgatcgtattgatacgtattctaaaaatgataaaagtttc
gttaatataatcgattataagtcatcagctggaagtgcaacattagacttaactaaagtt
tactatggtcttcaaatgcaaatgatgacttatatggatattgtgctacaaaatcacaaa
cgattaggtttgactgaagaagtgaaacctggtggtttactatacttccatgtacacgag
ccgcgtataaaatttaaatcatgggcagacattgatgaagaaatacttgaacaacaatta
attaaaaactttaagttgagcggtttagttaatagtgatagagaagtcatcgaagcatta
gatacgagattagaaccgaaatttacttctgatattgttccagtaggacttactaaagat
ggctcaattactaaaaagggcagtcaagttgcagatgaagcaacaatatataaattcatt
cagcataacaaagataactttatagacacagcttctaatattatggatggccatacagaa
gtggcacctttaaaatacaaacaaacattaccatgtcaattttgtagttatcaatctgtt
tgtcatgtcgacggaatgattgatagtaaacgctaccgtacagttgatgaatcaattaat
ccaatagaagcgatacaagatattgagttagatggaggtgacaattaa
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