Staphylococcus simiae: SAMEA4384339_0825
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Entry
SAMEA4384339_0825 CDS
T06955
Symbol
addA
Name
(GenBank) ATP-dependent nuclease, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ssim
Staphylococcus simiae
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssim03400
]
SAMEA4384339_0825 (addA)
Enzymes [BR:
ssim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4384339_0825 (addA)
DNA repair and recombination proteins [BR:
ssim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SAMEA4384339_0825 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
ResIII
SAP30_Sin3_bdg
Dna2
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
SNV66178
LinkDB
All DBs
Position
1:892301..895951
Genome browser
AA seq
1216 aa
AA seq
DB search
MIPQKPQDVIWTDAQWQSIYASGQDILVAAAAGSGKTAVLVERIIQKILRDGIDVDRLLV
VTFTNLSAREMKHRVDQRIQEASLADPNNEHLKNQRIKIHQAQISTLHSFCLTLIQQHYD
VLDIDPNFRTSSEAENILLLEQTIDEVIESHYDKLDPAFIDLTEQLSSDRSDEQFRNIIK
QLYFFSVANPDPEVWLNQLAQSYTDDDKQQQLLQLLIDLSQVFLTAANESLNKAYDLFSM
AEGVEKHIAVIADERQLMTHVLDGGLVNTDFLIGHEFGQRLPNVTAKIKETNDMMIEALE
DAKEHYKKYKSLIDKVKNDYFSRSTEDLQNDMRLLAPRVDYLATIVKDVMKEFNLKKRSK
NILDFSDYEHFALQILTNSDGTPSEIAESYRQHFNEILVDEYQDTNRVQEKILSCIKTGE
ENNGNLFMVGDVKQSIYKFRQADPSLFIEKYNRFTLDGAHSGRRIDLSQNFRSRSEVLTT
TNYLFKHMMDDQVGEVTYDEAAQLYYGAPFDNASNPVNLNVLVEASAEDSELTGTEQEAQ
YIVEQVKDILNHYKVYDIKTDSYRNATYKDIVILERSFGQARNLQQAFKNEDIPFHVNSR
EGYFEQTEVRLVLSFLRTIDNPLQDIYLVGLMRSVIYQFTEDELAQIRIISSNDDYFYQS
IMNYMTSEEANTQLVDKLQRFIKDIQYYQQYSQDHPVYQLIDKFYNDHYVIQYFSGLIGG
RGRRANLYGLFNKAIEFENSSFRGLYQFIRFIDELISRGKDFGEENIVGPNDNVVRMMTI
HSSKGLEFPFVIYSGLSKQFNKQDLKRPVILNQQYGLGMDYFDVEKDMAFPSLASVAYKA
ITEKEMISEEMRLIYVALTRAKEKLFLIGRVKDDKVLQSLEQLSVSNGLIAVNERLTAAN
PFSLIYSILAKHQSMNIPDDLKFEKDIVNLDESIQPKVNINIDYFEDVSTEVTDNDDDYR
TVSYLQSMTQGNEDVKAKIAYQLDYQYPYVNDTLKPSKQSVSELKRQLETEESGTSYERV
RQYRIGYASYERPKFLSEQGKRKANEIGTLMHTVMQHLPFREQRLTDKELNDYIDSLISN
HIIDESAKKDIRITEIQSFIHSDLYLTIAQADQVFRELPFVVNQAMVDNMPEEDEDVSII
QGMIDLIFVKDGHYYFVDYKTDAFNRRRGMTDEELGQQLKEKYRIQMNYYRNTLQTILNT
TVHGYLYFFKFGTLEL
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgattccgcaaaaaccgcaagatgttatatggacagatgcacaatggcaaagcatctat
gcctctggacaagatattttagtagcagcagcagctggatcaggtaagacagcagttctt
gtagagcgtattattcaaaaaatattgcgtgatggtattgacgttgaccgcttacttgtc
gttacatttactaatctaagtgcaagagaaatgaaacatagggtggatcaacgaattcaa
gaggcgtcattagcagatcctaacaatgaacatttaaagaaccaacgtattaaaatacat
caagcacaaatatcaacgttacacagtttttgtttaacattaattcagcaacactatgat
gtcttagatattgatccgaattttagaacaagtagtgaagcagaaaatattttattgtta
gaacaaacaatagatgaagttattgaaagtcattatgataagttagatcctgcatttatc
gatttaacagaacagttatcttcagatagaagtgatgaacaatttagaaatattattaaa
caattgtatttctttagtgttgctaacccagatcctgaagtatggctaaatcaattagct
caatcttatacagatgatgataaacaacaacaattgttgcaattattaatagatttatca
caagtttttttaacagctgccaatgaatctttaaataaagcatatgatttatttagtatg
gcagaaggtgtagagaaacatatagcggttattgcagatgaacgtcaattaatgacgcat
gtgttagatggtggcttagtcaatacggactttttaattggacatgaatttggacagcgg
ttacctaatgttacagcaaaaattaaagaaacaaatgacatgatgattgaagctttagag
gatgcaaaggaacattataaaaaatataagtcattaattgataaagttaaaaatgactat
ttttcacgaagtactgaagatttacaaaatgatatgcgtctgttagcacctagagtcgat
tacttagcgacaattgtaaaagatgttatgaaagaatttaatctaaaaaagcgtagcaaa
aatattttggatttctcagactatgaacattttgctttgcaaattttaactaatagtgac
ggaacgccttcagaaattgctgaatcatatcgtcaacattttaatgaaattttagtcgat
gaatatcaagatactaaccgagtacaagaaaaaatattatcatgtattaaaacgggtgaa
gaaaataatggtaacttgtttatggttggtgatgttaaacaatctatttataaatttaga
caagctgacccaagtttatttattgaaaagtataatcgctttactttagacggcgctcat
agtggtaggcgaattgatttatcacaaaattttagatcacgttccgaagtattaacaaca
acaaattacttatttaaacatatgatggatgaccaagttggcgaagtgacttatgatgaa
gcagcacaactttattatggtgcaccatttgataatgcttcaaacccagttaatttaaat
gtcttagttgaagcaagtgcagaagatagtgaattgaccggcactgaacaggaagcacaa
tatattgttgaacaagttaaagatattttaaatcattataaagtctatgatattaaaaca
gatagttatagaaatgcaacgtacaaagatatcgttattttagaacgcagttttggacaa
gctagaaatttacaacaagcctttaaaaatgaagatataccatttcatgtgaatagtaga
gaaggttattttgagcaaacagaagtccgtttagtattgtcatttttaagaacaattgac
aatccgttacaagatatatatttagttggcttaatgcgttcagtcatttatcagtttact
gaagatgagcttgctcaaattagaattattagttcaaatgatgattacttctatcaatca
ataatgaattatatgacaagtgaagaagctaacacacaacttgtagataaattacaacgt
tttattaaagacatccaatattatcaacaatatagtcaagatcatcctgtctatcaactc
attgataaattttataacgatcattatgttattcaatattttagtggtctaatcggagga
agaggtagacgtgctaatctatatggtctatttaataaagcgatagaatttgaaaattct
agttttagaggattatatcaatttattcgttttattgatgaattaataagtaggggtaaa
gattttggtgaagagaatattgttggtcccaatgataatgttgtcagaatgatgacaatt
catagtagtaaagggctagaatttccatttgtcatatattctggtttatcgaagcaattt
aataaacaagatttaaagagaccagttattttaaatcaacaatatggtttaggaatggat
tactttgatgtagaaaaagacatggctttcccatcattagcttctgtagcatataaagca
atcactgaaaaagaaatgatttcagaagagatgcgactcatttatgtagcactaacaaga
gctaaagaaaaactcttcctgattggacgtgttaaagatgataaagtattacaatcattg
gaacaactttctgtatctaatggcttgatagcagttaatgaacgcttaacagcagccaat
ccattttctttaatttatagcatcttagcaaaacatcagtcaatgaatattcctgatgat
ttgaaatttgaaaaggatatcgtcaaccttgatgaaagtatacaacctaaggttaatatt
aatattgattattttgaagatgtatcaacagaagtaacagataatgatgatgactataga
actgtgagttatttacaatcaatgacacaaggtaatgaagatgttaaagcgaagatagca
tatcaacttgattatcaatacccatatgttaacgatacactcaaaccatctaaacaatcg
gtttctgaattaaaaagacaattagaaactgaagaaagtggcacaagttatgaacgtgtc
agacaatatcgtattggttatgcatcttacgaacgtcctaaatttttaagtgagcaaggc
aaaagaaaagcaaatgaaataggtaccttgatgcatacagtgatgcaacatttgcctttt
agagaacaacgattaactgacaaagaactaaatgattatattgacagtttaattagtaat
catattatcgatgagagtgctaaaaaagatattagaataactgaaatacagtcatttatt
catagtgatttatatttaacaattgctcaagcagatcaagtatttcgagaattaccattt
gtagtgaatcaagcaatggtcgataatatgcctgaagaagatgaggatgtttcaatcatt
caagggatgatagatttaattttcgttaaagatggtcattattatttcgtcgattacaaa
acggatgcctttaaccgtcgtcgtggtatgacagatgaagaattaggacaacagttaaaa
gaaaaatatcgcatacaaatgaattattatcgtaatacgttacaaactattttaaatact
acggttcatggttatttgtatttcttcaaatttggaacattagaattataa
DBGET
integrated database retrieval system
