Staphylococcus simiae: SAMEA4384339_0988
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Entry
SAMEA4384339_0988 CDS
T06955
Symbol
ykoD_1
Name
(GenBank) Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
KO
K01552
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
ssim
Staphylococcus simiae
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssim02000
]
SAMEA4384339_0988 (ykoD_1)
Transporters [BR:
ssim02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
SAMEA4384339_0988 (ykoD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
AAA_23
nSTAND1
AAA_16
nSTAND3
RsgA_GTPase
AAA_18
Mg_chelatase
T2SSE
Rad17
NACHT
AAA_15
G-alpha
AAA_5
NB-ARC
FtsK_SpoIIIE
ATPase_2
RNA_helicase
AAA_14
NTPase_1
AAA_24
AAA_7
KAP_NTPase
Pox_A32
AAA_19
bpMoxR
ABC_ATPase
cobW
YobI-ATPase
AAA_33
PRK
Dynamin_N
DO-GTPase2
MobB
AAA_13
MMR_HSR1
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
SNV67974
LinkDB
All DBs
Position
1:complement(1040544..1041947)
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AA seq
467 aa
AA seq
DB search
MLKVSNLRLKYPNGQKKIFDDLNLTIKDKEKLLLLGPSGSGKSTLLNVLSGIVPNLVELP
LKYDELHITSSNGIIFQDPDNQFCMPKVYEELAFVLENKQVPRYEMTEQIERALSMVNLD
VTPHTYIKDLSGGMKQKLAIAETILQQAETLFLDEPTAMLDDQATQELWQKLIDLWQDQT
VIIVEHKVDYIWDVVDRALLMDYDGSIIADDQPHNILQHYEHLLSQFGVWHPNAWNDAPT
NILKTPTHKTKLFNFSDGQVIRGKKALFQVEQLPIYTHEWIAITGQNGSGKTSLLESIMH
LIKYKGKMTFKNHTLQSIKDAAQHMFLVYQNPELQFITNSVYEEINIQHNHLNAEESNDK
TTQLLQLLKLESVANQHPFELSMGQKRRLSVATALSSNADIIFLDEPTFGLDSHNTFQLI
KLFQQRVNKGQTIVMVTHDQNIIARYSTRQLTIDNGHLIDSEGECHV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaaagttagtaatttacgattaaaatatcctaatggtcaaaagaaaatttttgac
gatttaaatcttacaattaaagacaaagaaaaattattactattaggaccttctggctca
ggtaaaagtactttgttaaatgttttaagcggcattgttccaaatttagttgaattacca
ttaaaatatgatgaattacatatcacttcatctaatggcattatttttcaagatcctgat
aaccaattttgtatgcctaaagtatatgaagaactagcttttgttctggaaaataagcaa
gtaccacgatatgaaatgactgaacaaatagaacgtgcattatctatggttaatttggat
gtcacgcctcacacatatattaaagacttaagtggtggtatgaaacaaaaattagctatc
gcagaaacaatcttacaacaagctgaaactttgttcttagatgaaccgactgctatgtta
gatgatcaagctactcaagaattatggcaaaaattaattgacttatggcaagaccagacg
gttattatcgttgagcataaagtggattatatctgggatgtcgttgatcgtgcgttatta
atggattatgatggcagtattattgctgatgatcaaccacacaatattttacagcattat
gaacatttgctttcacaatttggtgtatggcatccaaatgcatggaatgatgcacctact
aacatattaaagacaccaacgcataagactaaactgtttaattttagtgatggacaagta
ataagaggtaaaaaagcattatttcaagtcgagcaactaccaatctatacacatgaatgg
atcgcaattactggtcaaaatggtagcggtaaaacgtctttattagaatcaatcatgcat
ttaattaaatacaaaggtaaaatgacgttcaaaaaccatacacttcaatctattaaagac
gcagcacaacatatgtttctagtctatcagaatccagaattacaatttataacaaattca
gtttatgaagaaataaatatccaacacaatcatttaaatgctgaagaaagtaatgacaaa
acgacacaattgttgcagctattaaagttagaaagtgtcgcaaatcaacacccttttgaa
ttatctatgggacaaaaaagacgtctcagtgtcgcaactgctttaagctctaatgcagac
atcatctttcttgacgaaccaacttttggcttagatagtcataatacatttcaactaatt
aaactttttcaacaacgtgtgaataagggtcaaactatcgtaatggtaacacatgatcag
aatatcattgcacgttattctactcgacaattaactatcgacaatggtcatttaatagac
agcgagggtgaatgtcatgtttga
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