Staphylococcus simiae: SAMEA4384339_1415
Help
Entry
SAMEA4384339_1415 CDS
T06955
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ssim
Staphylococcus simiae
Pathway
ssim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SAMEA4384339_1415 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssim03400
]
SAMEA4384339_1415 (xseA)
Enzymes [BR:
ssim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SAMEA4384339_1415 (xseA)
DNA repair and recombination proteins [BR:
ssim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SAMEA4384339_1415 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gal80p_C-like
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
SNV72682
LinkDB
All DBs
Position
1:complement(1530595..1531932)
Genome browser
AA seq
445 aa
AA seq
DB search
MSDYLSVSALTKYIKYKFDQDPHLQSILLKGELSNFKKHSSGHLYFNVKDKESVISAMMF
KGSASNLNFEPKEGDEVLLEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLEQLKKKLSK
EGYFDNSNKKAIPRFPHKIAVLTAGTGAAIRDIHSTINSRFPLVEQIQINTLVQGEKAKD
DIIEKIQYADSLGVDTIIVGRGGGSIEDLWNFNEEEVVKAIFNCQTPIISAVGHETDFTL
SDFVADVRAATPTQAAVIATPDQFDLMEQIKQYQFTLTRFIKKYIDQQQKHVDYLSSYYK
FKQPSLLYDQQIQRRDDLEKRLNQNILNTLEQQRHKLLLTQQRFSLKDLQYNVHDKAQSN
DQLKEQLIKILNNKVMSYQNELKYKVENLNNLSPTNTMLRGYAIINKNDKVITSTKDLNV
DDNMTLTMKDGTVDAKVTKVRCNDD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatttaagtgtttcagccctaactaaatatattaaatataaatttgatcaa
gatccacacttacaatctatccttttaaaaggagaactttcaaattttaaaaaacattca
agtggtcatctatattttaatgttaaagataaagaaagtgttataagtgcgatgatgttt
aaaggtagtgcttccaatttaaattttgaacctaaagaaggggatgaagtgttattagag
gcacgagtatctgtgtatgaacgtcgaggaaattatcaaatctatgttaacaagatgcag
ttagatggcattggtaatttatatcaaaaattagaacagttaaaaaagaaattatctaaa
gaaggctattttgataatagtaataaaaaagctatacctagatttccacataaaatagca
gtgttaacggcaggtacaggtgcagcaattagagatattcattcaactattaatagtaga
tttcctttagttgaacaaattcaaattaatacgttagttcaaggtgaaaaagctaaagat
gatattattgaaaaaattcaatatgcagatagtttaggtgtagatacaatcattgttggt
cgaggtggtggatctattgaagatctatggaattttaacgaagaagaagttgttaaagct
atatttaattgtcaaacaccaatcatatctgcagtaggacatgagacagattttacgttg
agtgattttgttgctgatgtaagagcagcaacacctacacaagctgctgtgattgctaca
cctgaccaatttgacttaatggagcaaattaaacagtatcaatttacattaacacgattt
attaaaaagtatatcgatcagcaacaaaaacatgttgattatttatcatcatattataag
tttaaacaaccatcactattatatgatcaacaaattcaacgacgtgatgatttagaaaaa
aggttgaatcaaaacattttaaatacgcttgaacagcaacgtcataagttgttgttgact
caacaaagatttagtttaaaagacttacaatataatgttcatgacaaagcacagagtaat
gaccaattaaaagaacagcttatcaaaatcttaaataataaagtcatgtcttatcaaaat
gaacttaaatataaagtggaaaatttaaataacttgagtccaacgaatacaatgttgaga
ggttatgcaataattaataaaaatgataaagtcattaccagtacaaaagacttgaatgtt
gatgataatatgacattaacaatgaaagatggtactgtagatgcaaaagtgacgaaagta
aggtgtaatgatgactaa
DBGET
integrated database retrieval system
