Staphylococcus simiae: SAMEA4384339_1477
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Entry
SAMEA4384339_1477 CDS
T06955
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ssim
Staphylococcus simiae
Pathway
ssim03030
DNA replication
ssim03430
Mismatch repair
ssim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4384339_1477
03430 Mismatch repair
SAMEA4384339_1477
03440 Homologous recombination
SAMEA4384339_1477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssim03032
]
SAMEA4384339_1477
03400 DNA repair and recombination proteins [BR:
ssim03400
]
SAMEA4384339_1477
Enzymes [BR:
ssim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4384339_1477
DNA replication proteins [BR:
ssim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA4384339_1477
DNA repair and recombination proteins [BR:
ssim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA4384339_1477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF3781
DUF2018
P8
Motif
Other DBs
NCBI-ProteinID:
SNV73416
LinkDB
All DBs
Position
1:complement(1588915..1589889)
Genome browser
AA seq
324 aa
AA seq
DB search
MSDNIVTIYGDVPELVEKQSSELIDQYLQEEKDDFNFVKYNLLETEISPIIEETLTLPFF
SDKKVILVKNAFVFTGEKAPKEMNHNIEQLIEFIEKYDGDNLIIFEVYQAKLDERKKLTK
TLKKYAKIKKIEQMSEEDIKHWIQSKLNDNFKDIKKDALDLFIELTGINYNIVSQEIDKL
MLFLGDRPTINKNDVNQIINRSLEQNVFLLTEYIQKGQKEKAIHLVKDLITMKEEPIKLL
ALITSNYRLFYQCKILSQKGYSGQQIAKTIGVHPYRVKLALGQVRHYQLEQLLNIIDACA
ETDYKLKSSYMDKQLILELFILSL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaatattgtaactatatatggagatgtacctgaattagtagaaaaacaaagc
tcagagttaatagatcagtatttacaagaagagaaagatgattttaatttcgtaaagtat
aatttattagaaacagaaatatctccaattatagaagaaacgttaactttacctttcttt
tcagataaaaaagtaattttagtcaaaaatgcatttgtttttacaggtgaaaaagctcca
aaagaaatgaaccacaatattgaacaattaatagagttcattgaaaagtatgatggggat
aatttaatcatatttgaagtatatcaagcaaaattggacgagagaaaaaaattaactaaa
acattaaaaaaatatgcaaaaataaaaaaaatcgaacagatgtcagaagaagatataaaa
cattggattcaaagtaaattaaatgacaattttaaagatatcaaaaaggatgctttagat
ttgtttattgaattgacaggcattaattataatattgtttctcaagaaattgacaaatta
atgttatttctaggagatcgtccaacaataaataaaaatgatgtaaatcaaattattaat
agaagtttagagcaaaatgtgtttttattaacagaatatattcaaaaaggacaaaaagaa
aaagctattcaccttgttaaagatttaataactatgaaagaagaaccaataaaattatta
gcattaataacaagtaattatagattattttatcagtgtaaaattcttagtcaaaaaggg
tacagtggtcaacaaattgctaaaacaattggtgtacacccctatagagttaaattagca
ttagggcaagtacgacattatcaattagaacaactattaaatattattgacgcctgtgct
gaaaccgattataaattaaaatcttcatacatggataagcaattaattctagaactattt
atcttatcattataa
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