Staphylococcus simiae: SAMEA4384339_1572
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Entry
SAMEA4384339_1572 CDS
T06955
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ssim
Staphylococcus simiae
Pathway
ssim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4384339_1572 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssim03400
]
SAMEA4384339_1572 (mutM)
Enzymes [BR:
ssim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SAMEA4384339_1572 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAMEA4384339_1572 (mutM)
DNA repair and recombination proteins [BR:
ssim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMEA4384339_1572 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Deam_C
Zf_2nd_IFT121
Motif
Other DBs
NCBI-ProteinID:
SNV74278
LinkDB
All DBs
Position
1:complement(1683554..1684426)
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AA seq
290 aa
AA seq
DB search
MPELPEVEHVKRGIEPYIIGETIDKVLFSPKVIEGKDSGRATIIKGIELDTFKQLSEGYS
IKKVTRRSKYIVFNIENDHDQRVLISHLGMAGGFFIVDQLHDILIPNYRKHWHVIFELSN
GKKLVFSDIRRFGEIRNVATIESYPPFLDIAPEPFSDDALTYYLKRINQKTNINKPIKQV
ILDHKVIAGCGNIYACEALFRAGIRPDKKVSDLTHQQQEMVFYYVREVLEKGIKYGGTSF
SDYRHADGKTGAMQLHLNVYKQNICKVCGDHIATQVIATRNSHYCPTCQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccggaagtagaacacgttaaacgtggaattgaaccctatattattggg
gaaacaattgacaaagtattgttctcaccaaaagttatcgaaggtaaagattccggaaga
gcaactattattaaaggaattgaacttgataccttcaaacaattatctgaaggttatagc
attaaaaaagtaactagacgtagtaaatacatcgtatttaatattgaaaatgaccatgac
caacgcgtgcttattagtcatttaggcatggcaggtggattttttatagtcgatcaacta
catgatattttaattcctaattatcgtaaacattggcacgttatttttgaattatctaat
gggaaaaagttagttttttcagatattcgacgttttggtgaaattagaaatgtggctact
attgaatcatatccaccatttttagatattgctccagaaccatttagtgatgatgcacta
acatattatttaaaacgtatcaaccaaaaaactaatattaacaaaccaattaaacaggtt
attttagatcataaagttattgcaggttgtggtaatatttatgcatgtgaagcacttttt
agagcaggtatacgccccgataaaaaagtaagtgacctgacacatcaacaacaagaaatg
gtgttttattatgttagagaagtattagaaaaaggtattaaatatggtggaacaagcttt
tcagattaccgacatgcagatggtaaaactggtgcaatgcaattgcatttaaatgtatat
aaacaaaatatctgtaaagtttgtggtgatcatatagcaacacaggtaatagcaactaga
aatagtcattattgcccaacatgtcagaaataa
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