Staphylococcus simiae: SAMEA4384339_1573
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Entry
SAMEA4384339_1573 CDS
T06955
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssim
Staphylococcus simiae
Pathway
ssim03030
DNA replication
ssim03410
Base excision repair
ssim03420
Nucleotide excision repair
ssim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4384339_1573 (polA)
03410 Base excision repair
SAMEA4384339_1573 (polA)
03420 Nucleotide excision repair
SAMEA4384339_1573 (polA)
03440 Homologous recombination
SAMEA4384339_1573 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssim03032
]
SAMEA4384339_1573 (polA)
03400 DNA repair and recombination proteins [BR:
ssim03400
]
SAMEA4384339_1573 (polA)
Enzymes [BR:
ssim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4384339_1573 (polA)
DNA replication proteins [BR:
ssim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SAMEA4384339_1573 (polA)
DNA repair and recombination proteins [BR:
ssim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SAMEA4384339_1573 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4384339_1573 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
SNV74287
LinkDB
All DBs
Position
1:complement(1684442..1687075)
Genome browser
AA seq
877 aa
AA seq
DB search
MNKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAVYGFAMLLEKILKEEQPNHFLVAFDAG
KTTFRHEKYSEYKGGRQSTPPELSEQFPYIRQLLDAYHIKRYELDNYEADDIIGTLSREA
DQAGFQTIIITGDRDLTQLATENVTIYYTKKGVTDVDHYTPEFIAEKYNGLKPKQIIDMK
GLMGDSSDNIPGVAGVGEKTAIKLLNQFQNVEGVYEHIDDVSGKKLKEKLENSKEDAFMS
KDLATINVESPIGVTLADTKMIDQENNNDKIELFKKLEFKQLLSDLDSDQADENTVVEKT
FDIIDNFNDINFETISEASIHFELEGSNYLKDRILKFAVYIGDQHIVIDAQNIKDYPQLV
AWLENQSTTKIVYDAKKTYVAAHRLNIDIQHIDFDVMLASYIIDPSRTIDDVQSVVSLYG
QNYVKDNVAIYGKGKKFQVPEDDVLNPQVAAISEAINEAKPVMEEQLKEYNQLSLLADLE
LPLARILSQMEETGIYTDVNDLKEMEQEIQQKLDVLINNIHEAAGEQFNINSPKQLGVVL
FETLKLPVIKKTKTGYSTAVDVLEQLQGEHPIIDYILEYRQLSKLQSTYVEGLQKVISDD
QRIHTRFNQTLAQTGRLSSIDPNLQNIPVRLEEGRKIRKAFKPTSKDSVILSADYSQIEL
RVLAHITQDESMKEAFINGDDIHTATAMKVFGVEADEVDSLMRRQAKAVNFGIVYGISDY
GLSQSLGITRKKAKAFIDDYLDSFPGVKQYMSDIVKDAKAVGYVETLLHRRRYIPDITSR
NFNLRSFAERTAMNTPIQGSAADIIKLAMVQFADKVEDTNYHATLLLQVHDELIFEVPKS
EVEDFSKFVEEIMENAIQLDVPLKVDSSYGPTWYDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattagtattaatagatggtaatagtttaagttttagagcgttttatgcttta
ccattattatcaaataaagcaggaatccataccaatgcagtttatggttttgccatgtta
cttgaaaagattttaaaagaagaacaacctaatcattttttagtagcttttgatgcaggt
aaaacaactttcagacatgaaaaatatagtgaatataaaggtggacgtcaatcaacccca
ccagaattaagcgagcaatttccatatatacgtcaattattagatgcatatcatattaaa
cgttatgaattagataactatgaggctgatgatattattggaacattaagtagagaagcc
gatcaagccggttttcaaaccattattattactggagatcgcgatttaacgcaattagca
acagaaaatgtcacaatttattatactaaaaagggtgttactgatgtagatcattacaca
ccagaatttattgctgagaaatataatgggcttaaacctaaacaaattatagatatgaaa
ggtttaatgggtgattcctctgataatattccaggcgtggctggtgttggagaaaaaaca
gctattaaattactcaatcaatttcaaaatgttgaaggtgtatatgaacatatcgatgat
gtttctggtaaaaagttaaaagaaaaacttgaaaatagtaaagaagatgcctttatgagt
aaagacttagctacaattaatgttgaaagtccaattggcgttacacttgcagatactaaa
atgatagatcaggaaaacaataatgataaaattgagttatttaaaaaactagaatttaaa
caattattgtcagacttagatagtgaccaagctgatgaaaacacggttgttgagaaaacg
ttcgatattatagataattttaacgatattaattttgaaacaatatcagaagcgtctatt
cattttgaattagaaggtagtaattatttaaaagatcgtatacttaagtttgcagtgtat
ataggagatcaacatattgtcattgatgctcaaaacattaaagattatccgcagcttgtt
gcttggctagaaaatcaaagcacgactaaaatagtgtatgatgctaaaaaaacatatgtt
gctgcgcatagattaaatattgatattcagcatattgattttgacgttatgttagcaagc
tatattatagatccctcacgcacgattgatgatgtacaatctgttgtatcattgtatggt
caaaattatgtaaaagataacgtcgcaatctatggtaaaggtaaaaagttccaagtacct
gaagatgatgttttaaatccacaagtagcagcaattagcgaagcgataaatgaagctaaa
cctgttatggaagaacaattaaaagaatataatcaactttctttattagctgacttagag
ttacctttagcacgaattctaagtcaaatggaagaaacgggtatttatactgatgttaat
gatttaaaggaaatggaacaagaaatacaacagaagttagatgtcttaattaataatatt
catgaagctgcaggagaacaatttaatattaattcgcctaaacagttaggtgttgtactt
tttgaaacacttaaattaccagttattaaaaagaccaaaacaggttattctactgccgta
gatgtcttagaacaattacaaggtgagcatccaatcatagattatatcttagaatatcga
caattatctaaattacagtcaacatatgttgaaggtttacaaaaagtaattagtgatgat
caacgtattcacacaagatttaatcaaactttggcacaaactggacgattatctagtata
gatccaaatctgcaaaatatccctgtcagattggaagaaggacgaaaaatacgtaaagca
tttaagccaacatctaaagatagtgtgattttatcagctgattattcgcaaattgaacta
cgtgtgctagcacatatcacacaagatgagagtatgaaagaagcttttattaatggtgat
gatattcatactgctactgccatgaaagtatttggcgttgaagctgacgaagtagatagt
ttaatgcgtcgacaggcaaaagcagttaactttggcattgtatatggcattagtgattac
ggtctaagtcaaagtttaggaataacacgaaaaaaagccaaagcgtttattgatgactat
ttagatagtttccctggcgtaaaacaatatatgtcagatatagttaaagatgccaaagca
gttggatacgttgaaacattactacatcgccgacgttatataccagatatcactagccgt
aattttaatttaagaagttttgctgagcgtactgctatgaatacaccaattcaaggaagt
gcagcagatattattaaacttgctatggtacaatttgctgacaaagttgaagatacaaac
tatcatgcaacgttattattacaagtacatgatgaattgatttttgaagtacctaaatca
gaagttgaagattttagcaaatttgttgaagagatcatggaaaatgccatacaattggat
gttccattaaaagtagattcaagttatggtccaacctggtacgatgcaaaataa
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