Staphylococcus simiae: SAMEA4384339_1827
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Entry
SAMEA4384339_1827 CDS
T06955
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssim
Staphylococcus simiae
Pathway
ssim03420
Nucleotide excision repair
ssim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4384339_1827 (pcrA)
03430 Mismatch repair
SAMEA4384339_1827 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssim03400
]
SAMEA4384339_1827 (pcrA)
Enzymes [BR:
ssim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4384339_1827 (pcrA)
DNA repair and recombination proteins [BR:
ssim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4384339_1827 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SAMEA4384339_1827 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
SNV76186
LinkDB
All DBs
Position
1:complement(1916525..1918717)
Genome browser
AA seq
730 aa
AA seq
DB search
MNALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITF
TNKAAKEMKERVQKLVGDEAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPKDAQKEANDYHSQMVATVYSGYQRQL
QRNEALDFDDLIMTTITLFERVPEVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFK
NLCVVGDSDQSIYGWRGADIQNILSFEEDYPEAKTIFLEQNYRSTKTILNAANEVIKHNS
ERKPKGLWTANTNGDKINYYEAMTERDEAEYVVREIMKHHRNGKPYSEMAILYRTNAQSR
VLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVPKRGVGPS
SVDKIQNYAVQNNISMFDALGEVDFIGLSKKVTQECLNFYELIQNLIKEQEFLEISDIVE
EVLKKSGYREMLERENTLESRSRLENLDEFMSVPKDYEENTPLEEQSLINFLTDLSLVAD
IDEADTESGVTLMTMHSAKGLEYPIVFIMGMEESLFPHIRAIKSDDDHEMEEERRICYVA
ITRAEEVLYITHATTRMLFGRSQSNMPSRFLQEIPEELLEKHSSSKRQTIQPKAKPVTKR
GFSQRTTSSKKQVTSSDWKVGDKVTHKAWGEGMVSHVNEKNGSVELDIIFKSQGPKRLLA
QFAPIEKKED
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcactattaaatcatatgaatacagaacagagtgaggctgttaaaacaacagaa
ggaccgttattaattatggcgggggctggttcaggtaagacacgcgttttaacacataga
attgcgtatttattagacgaaaaagatgtatcaccatacaatgttttagctattacattt
accaataaagccgctaaagaaatgaaagaacgtgtacaaaaattagtaggtgatgaagca
gaagtaatatggatgtcaacattccactccatgtgtgtgagaattttacgtcgtgatgct
gatcgtattggtattgaacgcaactttacaattattgatccaactgaccaaaaatcagta
atcaaagatgtgttaaaaaatgaaaatatagatagtaagaaatttgaaccacgtatgttt
attggtgcaattagtaacttaaaaaatgaactgaaaacgccgaaagatgcccaaaaagaa
gccaatgactatcattcacaaatggtggcaacagtgtatagtggttatcaacgtcaacta
caacgtaatgaagcgttagattttgatgatttaattatgacaacaattactttatttgaa
cgtgtacctgaagtattggaatattaccagaataaatttcaatatattcatgtagatgag
tatcaagatactaacaaagcacaatatacattagtaaaattattagcaagtaaatttaaa
aatttatgtgttgtaggggactcagaccaatctatctatggctggcgtggtgccgatatt
caaaacattttatcttttgaagaagattatccagaagcaaaaaccatttttctagaacaa
aattatcgttccactaaaaccattttaaatgctgctaatgaagtgattaaacataattca
gaacgtaaaccaaaagggctttggactgctaatacgaatggtgacaagattaattactat
gaagcgatgactgaacgtgatgaagcagaatatgtggtacgtgagataatgaaacatcat
agaaatggtaaaccatacagtgaaatggctattttatatagaacaaacgcacaatcacgt
gtacttgaagaaacatttatgaagtctaatattccttatactatggttggtggtcaaaag
ttctatgatcgtaaagaaattaaagatttattaagttatttacggattatagcaaatagc
aatgatgatattagtttacaacgtattatcaatgttccgaaacgtggtgttggtccttca
tcagttgataaaattcaaaactatgctgttcaaaataatattagtatgtttgatgcatta
ggcgaagttgattttattggcttatcgaaaaaagtaacacaagaatgtctgaatttttat
gaattgattcaaaatttaattaaagaacaagaatttttagaaataagtgatattgtagaa
gaagttctgaaaaaatcaggatatagagagatgctagaaagagaaaatacacttgaatca
cgcagtcgtctagaaaacttagatgaatttatgtctgtaccaaaagattatgaggaaaat
acaccattagaagaacaatcattaataaactttttaacagatctatcattagtagcagat
attgatgaagcagatactgaaagtggtgtaacattaatgactatgcactctgcaaaaggg
ttagaatacccaattgttttcatcatgggcatggaggaatcactattcccacatattaga
gcaattaaaagtgatgatgatcatgaaatggaagaagaacgtcgtatttgttatgttgcg
attactcgtgcagaagaggtattgtacattacacatgcaacgacacgtatgttatttgga
cgttcacaatctaatatgccttctcgatttttacaagaaattccagaagaattattagaa
aaacattcaagtagtaagcgccaaacaattcaacctaaagctaaaccagtgacaaaaaga
ggatttagtcaacgtacgacatcttctaagaaacaagtcacatcatctgattggaaagtt
ggcgataaagtcacacataaagcatggggcgaaggcatggttagtcatgtcaacgaaaaa
aatgggtcagtggaattagacatcattttcaaatctcaaggacctaaacgtttacttgct
caatttgcaccaattgagaagaaggaggattaa
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