Staphylococcus simiae: SAMEA4384339_1864
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Entry
SAMEA4384339_1864 CDS
T06955
Symbol
groL
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssim
Staphylococcus simiae
Pathway
ssim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4384339_1864 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssim03019
]
SAMEA4384339_1864 (groL)
03110 Chaperones and folding catalysts [BR:
ssim03110
]
SAMEA4384339_1864 (groL)
03029 Mitochondrial biogenesis [BR:
ssim03029
]
SAMEA4384339_1864 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssim04147
]
SAMEA4384339_1864 (groL)
Enzymes [BR:
ssim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SAMEA4384339_1864 (groL)
Messenger RNA biogenesis [BR:
ssim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAMEA4384339_1864 (groL)
Chaperones and folding catalysts [BR:
ssim03110
]
Heat shock proteins
HSP60 / Chaperonin
SAMEA4384339_1864 (groL)
Mitochondrial biogenesis [BR:
ssim03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SAMEA4384339_1864 (groL)
Exosome [BR:
ssim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SAMEA4384339_1864 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SAMEA4384339_1864 (groL)
Exosomal proteins of breast cancer cells
SAMEA4384339_1864 (groL)
Exosomal proteins of colorectal cancer cells
SAMEA4384339_1864 (groL)
Exosomal proteins of bladder cancer cells
SAMEA4384339_1864 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
SNV76447
LinkDB
All DBs
Position
1:complement(1961016..1962635)
Genome browser
AA seq
539 aa
AA seq
DB search
MVKELKFSEDARQAMLRGVDQLANAVKVTIGPKGRNVVLDKEFTAPLITNDGVTIAKEIE
LEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLRQGID
KAVKVAVEALHEISQKVENKNEIAQVGAISAADEEIGRYISEAMEKVGNDGVITIEESNG
LNTELEVVEGMQFDRGYQSPYMVTDSDKMVAELERPYILVTDKKISSFQDILPLLEQIVQ
SNRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVIT
DDLGLDLKDATIDMLGTANKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDR
EKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV
YQKVSAIEAEGDVETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAETGVGFNAATN
EWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAVVASIPDKNNDQPSMGGGMPGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagaattaaaattctctgaagatgcacgtcaagcaatgttacgtggagtagac
caattagcaaatgctgttaaagttacaattggtccaaaaggacgtaatgttgtcttagat
aaagagtttactgcaccgttaatcacaaatgatggtgtaactatcgctaaagaaattgaa
ttagaagacccttatgaaaatatgggagctaaattagtacaagaagtagctaataaaaca
aatgaaatcgctggtgacggtactactactgcaacagtattagcgcaagctatgattcaa
gaaggcctaaaaaatgttacaagtggtgctaatccagtcggcttacgacaaggtattgat
aaagctgttaaagttgctgttgaagccttgcacgaaatttctcaaaaagtagaaaataaa
aatgaaattgctcaagttggtgccatttctgctgcagatgaagaaattggacgttatatt
tctgaagcgatggaaaaagtaggtaacgatggtgttataacgattgaagagtctaatggt
ttaaatactgaattagaagttgttgaaggtatgcaatttgatcgtggttaccaatcacca
tatatggtaactgattcagataaaatggtagctgaattagaacgtccatatattttagta
actgataagaaaatctcttcattccaagatatcttacctttacttgaacaaattgtacaa
tctaatagaccaattttaattgttgcagatgaagttgaaggcgatgcattaactaatatc
gtattaaatcgcatgcgtggtacttttactgctgtagcagttaaagcacctggctttggt
gatcgtcgtaaagctatgttagaagacttagctatcttaacaggtgcacaagtcattact
gatgatttaggtttagacctaaaagatgccacaatcgatatgttaggtactgctaacaaa
gttgaagttactaaagacaatacgactgtagttgatggtgacggagatgaaaatagtatt
gatgctcgtgtgagtcaacttaaatcacaaattgaagaaactgaatcagactttgatcgt
gagaaactacaagaacgtcttgctaaattagctggtggcgttgcagttattaaagttggt
gcagcaagtgaaactgagttgaaagaacgtaaactacgtattgaagatgcattaaattca
actcgtgcagcagtagaagaaggtattgttgcaggtggtggtacagcattagttaatgta
tatcaaaaagtgagtgctattgaagcagagggcgatgtagaaactggtgtgaatattgta
cttaaagcattaactgcacctgtacgtcaaattgctgaaaatgctggtttagaaggatca
gtcattgttgaacgcttaaaaaatgctgaaactggtgttggattcaatgcagcaacaaat
gaatgggttaatatgttagaagaaggtattgttgacccaactaaagtaacacgttcagca
ttacaacatgcagcaagtgttgcagcaatgttcttaacaacagaagctgttgtagcatca
attccggataaaaataatgaccaaccaagcatgggtggcggaatgccaggaatgatgtaa
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