Staphylococcus simiae: SAMEA4384339_2047
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Entry
SAMEA4384339_2047 CDS
T06955
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ssim
Staphylococcus simiae
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssim03016
]
SAMEA4384339_2047 (truA)
Enzymes [BR:
ssim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SAMEA4384339_2047 (truA)
Transfer RNA biogenesis [BR:
ssim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAMEA4384339_2047 (truA)
Prokaryotic type
SAMEA4384339_2047 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
AAA_lid_6
Motif
Other DBs
NCBI-ProteinID:
SNV78307
LinkDB
All DBs
Position
1:complement(2153315..2154118)
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AA seq
267 aa
AA seq
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MRILVEITYNGSNFLGFQIQQQGRTVQQQFEKILQRMHKRHVRIHPSSRTDRGVHAVQQY
FHFDTELNIATSQWQYAMNSALPNDIYVTKVSVVDEQFHCRYDCLGKRYRYKVYQAAHRN
PFQSGLKTYIPDTLDLDKMNEAAKQFIGTHDFTGFCSQKTEVESKVRTLYQSEIVQTEEG
FDYIVTGSGFLYNMVRVLVAFLIEVGKGKKHVEDVPKLLESRNRNNVPFTAPAEGLYLEH
IYFEDNDLTNDFGNNIKIHRKKSLQND
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtatattagtagaaatcacatataatggtagtaattttttaggatttcaaattcag
caacaaggacgtacagtacaacaacaatttgaaaaaatactacaacgtatgcataaacga
catgtcagaattcatccatcaagtaggactgatagaggtgtgcatgctgtgcaacaatac
tttcattttgatacagaacttaatattgcaacgagccaatggcaatatgctatgaatagt
gccttgcctaacgatatttatgtaactaaagttagtgttgtagatgaacaatttcattgt
cgttatgattgcttaggtaaacggtaccgctacaaagtttatcaagctgcacatcgtaat
ccgtttcagagtggtttgaagacctatataccagacacattggatcttgataagatgaac
gaagcggctaaacaatttattggtacacatgattttacaggattttgttctcaaaagact
gaagttgaaagcaaggtaagaacgttatatcaaagcgaaatcgttcaaacagaagaaggc
tttgattatattgtgacaggctcaggattcctgtataatatggtacgtgttctcgtagct
ttcttaatagaagtgggtaaagggaagaaacatgtagaagatgttcctaaattattagaa
agtaggaatcgcaacaatgtaccttttactgctcctgcagagggactatacttagaacat
atttattttgaagataatgatttaacgaatgactttggcaataatataaaaattcatcgt
aaaaaatcattgcaaaatgattaa
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