Sphingomonas sinipercae: G7078_01470
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Entry
G7078_01470 CDS
T07461
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssin
Sphingomonas sinipercae
Pathway
ssin03030
DNA replication
ssin03410
Base excision repair
ssin03420
Nucleotide excision repair
ssin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G7078_01470 (polA)
03410 Base excision repair
G7078_01470 (polA)
03420 Nucleotide excision repair
G7078_01470 (polA)
03440 Homologous recombination
G7078_01470 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssin03032
]
G7078_01470 (polA)
03400 DNA repair and recombination proteins [BR:
ssin03400
]
G7078_01470 (polA)
Enzymes [BR:
ssin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G7078_01470 (polA)
DNA replication proteins [BR:
ssin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G7078_01470 (polA)
DNA repair and recombination proteins [BR:
ssin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G7078_01470 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G7078_01470 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
HHH
DprA_N
Motif
Other DBs
NCBI-ProteinID:
QIL01587
UniProt:
A0A6G7ZKR4
LinkDB
All DBs
Position
complement(278075..280879)
Genome browser
AA seq
934 aa
AA seq
DB search
MSEAQPHLYLVDGSSYIFRAYHRLPPLTNRHGQPAGAVYGYTTMLWKLAEGLNRADGPTH
MAVILDASESTFRNQLYDQYKAHRPPPPEDLVPQFPLIRTATRAFSIPCIEEAGLEADDI
IACYVTAACNAGWKTTIVSSDKDLMQLIQDGCVDMLDTMNDRRIDSAYVREKFGVGPAEL
GDVLALMGDKVDNVPGVPGIGPKTASQLIAEFGSLEAVLASTDKIAKPKLKQSLIDHADS
ARLSRQLVTLVCDSKLPEPLEELALKGIPAEPLREFLEEQGFKTLLNRLNGGAPASARSS
SGAGIDMMAATLGASPAKPAAPEKIEVDRSLYETVTDEAALDRWISEASAQGFVALDTET
DCIDCVVAKLAGISLATQPNRACYIPVGHSSADLYSDAPSQLPMHLVLDRLKPLLENPAV
LKIGHNLKYDWVMFEKAGITVAPFDDTMLLSFDLDAGLHGHGLDELAKLNFEHECIPFKQ
LCGTGKSQITFDKVPLKEATEYAAEDADITLRVWQRLKSRIAAENVAQVYERVDRPLVPV
IGRMERRGVKVDREYLARLSREFAEEIASLETRIYDSACGPFTIGSPQQLGEVLYGRLGL
KGGRKGKSGQYSTDVNELERLAGEGVECARLVLDWRQLSKLKSTYTDALQAQINPDTGRV
HTSFSLAGAQTGRLSSNEPNLQNIPIRTEIGRKIRDAFVAEPGHVLMSADYSQIELRLAA
HMADVPQLKQAFREKADIHSMTAEELFGTSDRDARNKAKTVNFAILYGISSWGLAGRLGV
SRDEGKFIIDRYFERFPGIRDYIAQTLAFVRETGFTRTLFGRKTHFPNIRSSNQSFRGGA
ERAAVNAPIQGTSADLIKRAMTRMDDALDAAGLGGVRMLLQVHDELVFEVPEGREEEAAE
VVRTVMSQAAAPSLQLDVPLDVEVGWGANWGTAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagcgcagccccacctctatctcgtcgacggctcgagctacatctttcgcgcc
tatcaccggctgccgccgctgaccaaccggcacgggcagccggcgggcgcggtctatggc
tatacgacgatgctgtggaagctcgcggaagggctcaaccgcgccgacgggccgacgcac
atggcggtcatcctcgacgcgtctgaatcgactttccgcaaccagctttacgaccagtac
aaggcacatcgcccgccgccgcccgaagacctggtcccgcaattcccgctgatccgcacc
gccacgcgcgccttttccattccgtgcatcgaagaggccgggctggaagcggacgacatc
atcgcttgctacgtcaccgccgcctgcaacgccggctggaagacgaccatcgtcagctcc
gacaaggatctgatgcagctgattcaggacggttgcgtcgacatgctcgacacgatgaac
gaccgccgtatcgacagcgcctacgtgcgcgagaagttcggcgtcgggccggccgagctt
ggcgacgtgctggcgctgatgggggacaaggtcgacaacgtgccgggcgtgcccggcatc
ggacccaaaacggcgtcccagctgatcgccgagttcgggtcgttggaagcggtgctggca
agcaccgacaagatcgccaagcccaagctcaagcagtcgctgatcgatcatgcggattcc
gcgcggctcagccgccagctggtcaccctggtttgcgattcgaagcttcccgagccgctg
gaagaactggcgctcaagggcattccggccgagccgctgcgtgaattcctggaggagcag
gggttcaagaccttgctcaaccggctgaacggcggtgccccggcaagcgcgcgcagcagc
agcggcgccggcatcgacatgatggccgcgacgctcggcgcgagccccgccaaaccggcc
gcgccggagaagatcgaagtcgaccgatcactgtacgaaacggtgaccgacgaagccgcg
ctggaccgctggataagcgaagcatcggcgcagggtttcgtcgcgctcgataccgaaacc
gattgcatcgattgcgtcgtcgccaagctggcggggatcagccttgcgacccagccgaac
cgtgcctgctacattccagtcggccattccagcgccgacctttattcggacgcgccgagc
cagctgccgatgcacttggtgctcgatcgattaaagccgttgctggaaaatccggcggtc
ctgaagatcggccacaacctgaaatacgattgggtgatgttcgaaaaggcgggcatcacg
gtcgcgccgttcgacgacacgatgctgctgagcttcgacctcgacgccggccttcacggc
cacggtctcgacgagctggcgaagctgaacttcgagcatgaatgcattccgttcaagcag
ctgtgcggcaccggcaagagccagatcacgttcgacaaggtgccgctgaaggaagcgacc
gaatatgcggcggaggacgccgatatcaccttgcgggtgtggcaacggttgaagagccgg
atcgcggcggaaaacgtcgcgcaggtgtatgagcgggtcgatcgcccgctggtgccggtg
atcggccgaatggaacggcgcggggtcaaggtcgatcgcgaatatctcgctcgcctgagc
cgcgaattcgccgaggaaatcgccagcctggagacccgcatctacgacagcgcctgcggc
ccgttcaccatcggatcgccgcagcagcttggcgaagtcctgtacgggcggcttgggctg
aagggcggccgcaagggcaagagcggccaatattcgaccgacgtcaacgagctcgaacgg
cttgccggagagggcgtcgaatgcgcccggctggtgctcgactggcgccagctcagcaag
ctcaagtcgacctacaccgacgcgctgcaggcccagatcaaccccgacaccggccgcgtg
cacaccagcttcagcctcgccggcgcgcagaccggccgcctgtcgtcaaacgaacccaac
ctccagaacatcccgatccggaccgaaatcgggcgcaagatccgcgacgccttcgtcgcc
gagccgggccatgtgctgatgagcgccgactacagccagatcgagcttcggctcgcggcg
cacatggccgacgtgccgcaattgaagcaggccttccgcgagaaagccgacatccacagc
atgaccgcggaggagctgttcggaacgtcagaccgcgacgctcgcaacaaggcgaagacg
gtcaatttcgcgatcctttacggcatttcgtcctgggggctggccgggcggctcggcgtg
tcgcgggacgaaggcaagttcatcatcgaccgctatttcgagcgcttccccggcatccgc
gactatatcgcgcagaccctggcgttcgtccgcgaaaccgggttcacccgcaccttgttc
ggccgcaagacgcatttccccaacatccgctcgtcgaaccagagctttcgcggcggggcc
gagcgggcggcggtcaacgcaccgatccagggcaccagcgccgacctcatcaagcgggcc
atgactcgaatggacgatgcgctggacgcagccggactgggcggcgtgcggatgcttctg
caagtccacgacgaattggtcttcgaagtgcccgagggccgcgaggaagaggccgcggaa
gtcgtcaggacggtgatgtcgcaagccgcggcgccgtcgctccaactcgacgtgccgctg
gatgtcgaagtcggctggggcgccaactggggcacggcgcattga
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