Sphingomonas sinipercae: G7078_03245
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Entry
G7078_03245 CDS
T07461
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ssin
Sphingomonas sinipercae
Pathway
ssin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G7078_03245 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssin03400
]
G7078_03245 (ruvB)
Enzymes [BR:
ssin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7078_03245 (ruvB)
DNA repair and recombination proteins [BR:
ssin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G7078_03245 (ruvB)
RecFOR pathway proteins
G7078_03245 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
AAA_3
Mg_chelatase
nSTAND3
AAA_33
AAA_22
Sigma54_activat
AAA_18
AAA_14
Rad17
Bac_DnaA
TsaE
AAA_28
RNA_helicase
DUF815
AAA_25
AAA_17
NACHT
AAA_24
NTPase_1
ABC_tran
NB-ARC
NPHP3_N
IstB_IS21
AAA_11
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
QIL01899
UniProt:
A0A6G7ZLV4
LinkDB
All DBs
Position
complement(637734..638777)
Genome browser
AA seq
347 aa
AA seq
DB search
MATDPARITTPERTSEDADAALRPKTLDEFIGQKSARENLRVFVSAAKSRGEALDHVLLH
GPPGLGKTTLAAILAREMGVGFRATSGPVIAKSGDLAALLTNLEDGDVLFIDEIHRLNPA
VEEVLYPAMEDRALDLMIGEGPSARSVRIDLPRFTLVGATTRQGLLTTPLRDRFGIPVRL
NFYTVDELEQVVRRAARLLAVEMTDDGSSEIARRSRGTPRIAGRLLRRVRDFAHAAGAAT
VDAGVADRALSRLEIDALGLDAMDRRYLMMIADLYGGGPVGVETLAAGLSEPRDTIEDVI
EPYLIQLGLIARTARGRCLNGRGYAHLGMPQPQGSQTGLFDNGAAPK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgatcccgcccgaatcacgacgcccgagcggaccagcgaggatgccgacgcg
gcgcttcgacccaagacgctcgacgaattcatcgggcagaagtcggcgcgggaaaacctg
cgcgtcttcgtcagcgcggccaagagccgcggcgaagcgctcgaccatgtcctgctccac
ggcccgccgggccttggcaagacgacgctggccgcgatcctcgcccgcgaaatgggcgtc
ggcttccgcgccacgtcgggcccggtcatcgccaagtcgggcgacctcgccgcactgctc
accaacctggaagacggcgacgtcctgttcatcgacgaaattcaccggctcaatccggcc
gtcgaggaagtgctctacccggcgatggaggatcgcgcactcgacctgatgatcggcgaa
gggccgtcggcccgctcggtccggatcgacctgccgcgcttcaccctcgtcggcgcgacc
acgcggcaggggctcctgaccacgccgctgcgcgaccgcttcgggatcccggttcggctc
aatttctatacggtcgatgagcttgagcaggtggtccgccgcgccgcccggctgctcgcc
gttgaaatgaccgacgacggctccagcgagatcgcccgccgctcccgcgggactccgcgc
atcgccgggcggctgctccgccgggttcgcgatttcgcccatgccgcgggggcggcgacc
gtcgacgcgggcgttgccgaccgtgccctctcccgcctcgaaatcgacgcgctcggcctc
gacgcgatggaccgccgctacttgatgatgatcgccgacctttacggcggcggcccggtc
ggggttgagacgctggccgccggcttgtcggagccgcgcgacacgatcgaagacgtgatc
gagccctatctcattcagctcggcctcatcgcccgaacggcaaggggacgctgcctcaat
ggccggggctacgcgcatctgggcatgccgcagccccagggcagccagacgggcctgttc
gacaatggagccgcgcccaagtga
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