Sphingomonas sinipercae: G7078_03825
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Entry
G7078_03825 CDS
T07461
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssin
Sphingomonas sinipercae
Brite
KEGG Orthology (KO) [BR:
ssin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssin03016
]
G7078_03825 (truB)
Enzymes [BR:
ssin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G7078_03825 (truB)
Transfer RNA biogenesis [BR:
ssin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G7078_03825 (truB)
Prokaryotic type
G7078_03825 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QIL03287
UniProt:
A0A6G7ZQL9
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All DBs
Position
complement(759872..760807)
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AA seq
311 aa
AA seq
DB search
MHGWVILDKPVGLGSTQAVSAVKRALREAGEPKTKVGHGGTLDPLASGVLPIAIGEATKV
AGRMLDATKAYDFTIRFGEETDTLDLEGAVIATSDVRPTLAQVEAVLCAFTGPIEQVPPA
YSALKIDGKAAYARARAGEEVEMGPRSVTVHALSILQPGESEEPAEDREQLEFRLSGSGE
VTLSATVSKGTYIRSLARDIARALNTVGHVTMLRRTRAGPFGLDSAISLDFLAETAKARE
LTRTVVPLQAALDDIPALPVTPDQAQLLRHGQRLAGFPATPGLQLACLDDVPVALVEAAV
DGLKVVRGFNL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atccacggctgggtcattctcgacaagcccgttggccttggctccacccaagcggtcagc
gcggtcaagcgcgcccttcgcgaggctggcgagccgaagaccaaggtgggtcatggcggc
acgctggacccgctcgccagcggcgtgcttccgatcgccattggcgaagcgaccaaggtc
gcgggccgaatgctcgatgcgaccaaggcttacgatttcaccatacggttcggcgaagag
accgatacgctcgacctggagggcgctgtgatcgccaccagcgacgtacgcccaacgctg
gcgcaggtcgaagccgtgctttgcgccttcaccggcccgatcgagcaagtgccgccggct
tattcggcactcaagattgacgggaaagccgcctacgcccgcgcccgcgccggggaggag
gtcgagatgggtccgcgatccgtcacggtgcacgctctctcgattcttcagcccggcgaa
agcgaggagccagcggaggatagagaacaactggagttccgtcttagcgggagcggcgaa
gtgaccctctcggccaccgtatcaaagggcacctacatccgctcgctggcccgcgacatt
gcccgggcgttgaacacggtcggccacgtcaccatgttgaggcggacacgcgctgggccg
ttcgggctcgattcggccatttcgctggacttcctggccgaaaccgctaaggcgcgcgag
ctgacgaggacggttgttccgcttcaagcggcgctggacgacatcccggccctccccgtc
acccccgatcaggcacagctgctccggcatggacagcgcttggccgggttccccgcaaca
ccggggctccaactggcctgcctggacgatgtcccggtggcgctggtcgaagccgcggtt
gacggcctcaaggtcgtccgggggttcaacctttaa
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integrated database retrieval system
