Sphingomonas sinipercae: G7078_04580
Help
Entry
G7078_04580 CDS
T07461
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssin
Sphingomonas sinipercae
Brite
KEGG Orthology (KO) [BR:
ssin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssin03032
]
G7078_04580 (topA)
03400 DNA repair and recombination proteins [BR:
ssin03400
]
G7078_04580 (topA)
Enzymes [BR:
ssin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G7078_04580 (topA)
DNA replication proteins [BR:
ssin03032
]
Prokaryotic type
DNA Topoisomerases
G7078_04580 (topA)
DNA repair and recombination proteins [BR:
ssin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G7078_04580 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QIL02133
UniProt:
A0A6G7ZMH1
LinkDB
All DBs
Position
886895..889378
Genome browser
AA seq
827 aa
AA seq
DB search
MKLVVVESPAKAKTIEKYLGSGHKVLASFGHVRDLPPKDGSVDPDDGFAMQWQVSPDRAK
QLKAITDEAKTADTLILATDPDREGEAISWHVQEVLRQKKALPANVQRVAFNAITKAAVT
EAMAKPRALDEDLVDAYRARRALDYLVGFTLSPILWRKLPGAKSAGRVQSVALRLIVDRE
REIELFKPQEYWTVSASFDKDGQNFTARLVNFEGRKIDRLTIGSKGEADRAREAVEAGRF
TVQSVETKPFGRNPPPPFTTSTLQQEAARKLGFAASHTMRLAQSLYEDGAITYMRTDGVE
MAPEAVSAARKAIASRYDAGFVPDKPRHYTSKAKNAQEAHEAIRPTDFSKQRAGSGDHGR
LYELIYNRALASQMASARLERTTVELADGTGKAVLRATGQVVLFPGYLALYEEGRDDKGD
EEEGARMPHLREGDAPAKTGVEATQHSTQPPPRYSEASLVKRLEELGIGRPSTYASILQT
LKDREYVRVEKQRFLPEESGRLVTAFLERFFEKYVSFDYTAELEEELDDVSGGRLDWQKL
LEGFWHDFKPKAGEVMEQQPSEVTAALDEFLSPWLFPDKGDGSDPRLCPNCGTGRLALRG
GKYGAFVACSNYPECKYTQRFGQSGSETASGEPVDFGDGITLRSGRFGPYLQQGEGKEAK
RASVPKDVGTDALTPEMAQRLISLPREIGPHPESGLPITASIGRYGPYLAHNGKYAKLGS
TAEVFETGMNAAVAKLADAATGGRERGAAREPIAVLGAHPGSGKEIKVMEGRYGPYVTDG
TTHATIPKGTEPKSVVLEEAVQWIDERAAKGPAKKKGRGGPKRKKKA
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
ttgaagttagtcgtcgtcgaatcgccggccaaggcgaagaccatcgaaaagtatttgggc
agcggtcacaaggtcctcgcgtccttcggccatgtccgcgacctgccgcccaaggacggg
tcggtcgatcccgacgatggattcgccatgcagtggcaggtctcgccggaccgggcgaag
cagctgaaggcgattaccgacgaggcgaagacagccgatacgctgatcctggccaccgac
ccggaccgcgagggcgaagcgatcagctggcacgtgcaggaggtgcttcgccagaagaaa
gcgcttccggccaacgtccagcgggtggcgttcaacgccatcaccaaggccgcggtgacc
gaagcgatggccaagccgcgcgcgctcgacgaggatctggtcgatgcctatcgggcacgc
cgcgcgctcgattacctggtcggcttcaccttgtccccgatcctgtggcgcaagcttccc
ggcgccaagtccgccggccgcgtgcaatcggttgcgttgcgcctgatcgtcgaccgggag
cgcgagatcgagctgttcaagccgcaggaatattggaccgtcagcgccagcttcgacaag
gacggacagaacttcacggcccggctggtcaacttcgaaggccggaaaatcgaccggctg
accatcggcagcaaaggcgaggcggaccgcgccagggaagcggtcgaggcaggccgcttc
acggtccagtcggtcgagaccaagccgttcggccgcaacccgccgccgcccttcacgacg
tcgacgctgcaacaggaagcggcgcgcaagctgggcttcgcggccagccatacgatgcgc
ctggcccagtcgctctacgaggacggggcgatcacttacatgcggacggacggtgtcgag
atggcgccggaagcggtgagcgcggcgcgcaaggcgatcgccagccgctatgacgccggc
ttcgtccccgacaagccgcggcattacaccagcaaggccaagaatgcgcaggaagcgcat
gaagcgatccggccgaccgacttttccaagcagcgggcggggagcggcgaccacgggcgg
ctgtacgagctgatctacaaccgcgcgctggcgagccagatggcctcggcgcggctggag
cgcaccacggtcgagctggccgacggcactggcaaggcggtgctccgcgcgaccgggcag
gtagtgctcttccccggctacctcgcgctttacgaggaaggccgcgacgacaagggcgac
gaagaggaaggcgcgcgcatgccgcaccttcgcgaaggcgacgcgccggcgaagaccggg
gtcgaggcgacccagcattcgacgcagccgccgccgcgctattcggaggccagcctcgtc
aagcggctggaggagctcggcatcggccggccgtcgacctatgcgtcgatcctgcagacg
ctcaaggaccgcgaatatgtgcgggtcgaaaagcagcgcttcctgcccgaggagagcggc
cggctggtgacggcgttccttgagcgcttcttcgagaaatacgtcagcttcgattacacc
gccgagcttgaggaagagctggacgacgtgtccggcgggcggctcgactggcagaagctg
ctcgaaggcttctggcacgacttcaagcccaaggcgggcgaggtgatggagcagcagccg
tcggaagtgacggccgcgctggacgaattcctgtcgccctggctgttcccggacaagggc
gacggcagcgacccgcggctatgccccaattgcgggaccgggcggctagcgcttcgcggc
ggcaagtatggcgcgttcgtcgcttgctcgaactatcccgaatgcaaatacacccagcgg
ttcggccagagcggaagcgaaacggcgagcggcgagccggtcgacttcggtgacggaatt
acgctgcgcagcggacgcttcggcccctatctgcaacagggcgagggcaaggaggccaag
cgcgcttcggtgcccaaggatgtcgggaccgacgcgctgacgcccgaaatggcgcagcgg
ctcatctccctcccgcgcgaaatcgggccgcacccggaaagcgggctgccgatcaccgcg
tccatcgggcgttatggcccgtacctcgcgcacaacggcaaatatgccaagctcggctcg
accgccgaagtgttcgagacgggaatgaacgcggcggtcgccaagctggcggatgcggcg
accggcgggcgcgagcgcggcgccgcgcgcgagccgattgcggtgcttggcgcccacccg
ggaagtggcaaggagatcaaggtgatggaggggcgctacggcccctatgttaccgacggg
accacgcacgcgacgattcccaaaggtaccgagcccaagtccgtggtgctggaagaagcg
gtacagtggatcgacgaacgagccgccaagggtccggccaagaagaagggccggggcggg
ccgaagcggaagaagaaagcctaa
DBGET
integrated database retrieval system
