Sphingomonas sinipercae: G7078_06880
Help
Entry
G7078_06880 CDS
T07461
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssin
Sphingomonas sinipercae
Pathway
ssin03030
DNA replication
ssin03430
Mismatch repair
ssin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G7078_06880 (dnaE)
03430 Mismatch repair
G7078_06880 (dnaE)
03440 Homologous recombination
G7078_06880 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssin03032
]
G7078_06880 (dnaE)
03400 DNA repair and recombination proteins [BR:
ssin03400
]
G7078_06880 (dnaE)
Enzymes [BR:
ssin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G7078_06880 (dnaE)
DNA replication proteins [BR:
ssin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G7078_06880 (dnaE)
DNA repair and recombination proteins [BR:
ssin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G7078_06880 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Scaffold
COE1_HLH
DUF655
Motif
Other DBs
NCBI-ProteinID:
QIL03337
UniProt:
A0A6G7ZQR9
LinkDB
All DBs
Position
complement(1316637..1320029)
Genome browser
AA seq
1130 aa
AA seq
DB search
MLEGAMEPKTIAEQSAKLGFPAVALTDRNGLYAAMPFTDACIAKGVQPVVGAMLAVARPA
ELGVAGIDWLALLAKDESGYDNLCKLVSAAHLDRPVEQEPHVPFAKLDGLSGGLLALTAG
SEGALARLLADGQDDKASAYLDRLQALFKDRLYIELSRRGDPVEEAAEERLIDLAYARDL
PLVATNPAAYKDPSFHAAHDALLCIANSAYVESNERVTSSADAWLKDSAAMAELFIDVPE
ALANTAVIAQRCAVGAPKRRPILPRLSDQEDEQLRRDAHAGLDDRLTDRSAEDLARYRER
LDFELDVIINMGFAGYFLIVADFIKWAKANDIPVGPGRGSGAGSVVAWSLTITDLDPIEL
NLLFERFLNPERVSMPDFDIDFCETHRDKVIAYVQRKYGRDKVAQIITFGRLKARAVLKD
TGRVLQMSYGQVDRLAKLIPNHPTDPWTLERSLNGVSELAAEYKSDSQVKKLFDLAMRLE
GLPRHASTHAAGVVIGDRPLDELVPLYRDPRSDMPVTQFDMKYVEGAGLVKFDFLGLKTL
SVLKEGQRLLAASGVHVDLTALPLDDPAVYELLQKGDTVGVFQLESEGMRRTLSAVRPTG
FGDIIALVSLYRPGPMDNIPMFGDRKNGRAAIEYPHPMLEQVLRETYGIFVYQEQVMQAA
QVLAGYSLGEADLLRRAMGKKIQSEMDAQRARFVEGCAANDISPQKASELFDLIDKFAGY
GFNKSHAAAYALVAYQTAWLKTHHRPEFYAASMTFDLALTDKLSLFVEDMRRGGVECLPP
SVNASGACFTVEEGGVRYALGALKGVGEKAMEALVAERESGGAFSTIDNFAERVDPRILN
RRQIESLAGGGAFDELAANRASVFASAETILAHAASAADQRTSGQGGLFGAGDASVPPIR
LVDMQWSLSQRMAAEREAFGFYFSAHPVDAHAHLLAAYKVKRFGDLASVPIPAEERVTAT
MAALIEDTRWRTSAKGRRYQMATVSDPSGQFVATAFDDEATIALEQAAQSGACGLLTVEL
DRRPGDELPRVTIKRFQPLETLAKRTRLHLTIRVSDPAFMPAIAAELNRARGGTGVVRLI
VGTQTADEAVILAGRDFMLDAELAARITVLAGESSVDLSVQEPPKLALVG
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaggggccatggagcccaagacgattgccgagcaatcggccaagcttggtttc
cccgccgtcgcactcaccgatcgcaacggcctgtatgccgcaatgccgttcaccgacgcc
tgcatcgccaagggggtgcagccggtggtcggcgcgatgctggccgtggcccgcccggcc
gaactcggcgttgccgggatcgactggctggcgctgctggccaaggacgaaagcggctac
gacaatctgtgcaagctggtgtcggccgcgcatctcgatcggccggtcgagcaggagccg
cacgttcccttcgccaagcttgatggcctgtccggcggcctattggcattgaccgctggc
agcgagggcgcgctcgcccggcttctggcagatgggcaggacgacaaggcctcagcatac
ctcgaccggctgcaggcgctgttcaaggatcggctgtacattgagctcagccggcgcggt
gaccctgtcgaggaggccgccgaagaacgattgatcgaccttgcttacgcacgggatttg
ccgctcgtcgctaccaatcctgccgcttacaaggatcccagcttccatgccgcgcacgac
gcgctgctgtgcatcgccaattcggcctacgtcgaaagtaacgagcgggtaacttcgtcg
gccgacgcctggttgaaggattcggccgccatggccgagctcttcatcgacgttccggaa
gccctggccaacaccgcggtcatcgcccagcgctgtgccgtcggtgcgccgaagcggcgg
ccgatcttgccgagactctccgaccaggaagacgagcagcttcgccgggatgcccacgcc
ggcctcgacgaccggctcacggatcgaagcgcggaggatttggcgcgttatcgcgagcgg
ctcgatttcgaactcgacgtcatcatcaacatggggttcgcgggctacttcctgatcgtc
gccgactttatcaaatgggcgaaagcgaacgatattccggtcggaccgggccgcgggtcc
ggcgcgggctcggtcgttgcctggtcactgaccatcaccgatctcgatccgatcgagctc
aacctgctgttcgaacgcttcctcaatccggaacgcgtgtcgatgccggacttcgacatc
gatttttgcgaaacccatcgcgacaaggtgattgcctacgtccagcgtaaatatgggcgg
gacaaggtcgcgcagatcatcacgttcgggcgcttgaaggcccgcgccgtgctcaaggac
acggggcgagtcttgcagatgagctacggccaggtcgatcgcctggccaagctgatcccg
aaccatccgaccgacccttggaccctcgagcggtcgctcaacggcgtctcggaactggcc
gccgaatataagtcggacagccaggtgaagaagctgttcgacctggcgatgcggctggag
ggcttgccgcggcacgcctcgacccacgcagcgggtgtggtcatcggcgaccggccgctg
gacgaactcgtcccgctctaccgcgatccgcgctccgacatgccggtcacccaattcgac
atgaaatatgtcgagggcgccgggctggtgaagttcgatttcctcggcctcaaaaccctg
tcggtgctcaaggaagggcagcggctgctcgccgcaagcggcgtgcatgtcgacctgacg
gccctcccgctggacgaccccgcggtctacgaactgctgcagaagggcgacacggtcggc
gtcttccagctggaatcggaagggatgcggcggacgctgtcggcggtcaggccgaccggc
ttcggcgacatcatcgcactggtctcgctgtatcgccctggcccgatggacaacatcccg
atgttcggcgaccgcaagaatggccgcgccgccatcgaatatccgcatccgatgctggaa
caggtcctgcgcgaaacctacggcatctttgtctaccaggaacaggtgatgcaggcggcg
caggtgctcgccggctacagcctgggcgaggccgatttgcttcgccgtgccatgggcaag
aaaattcagagcgagatggacgcgcagcgggcccggttcgtcgaaggctgcgcggcgaac
gacatttcgccgcagaaggcgtcggagctgttcgacttgatcgacaagttcgccggctat
ggcttcaacaagagccacgccgcggcctatgcactcgtcgcctaccagacggcctggctc
aagacgcaccaccgtcccgaattctatgccgcctccatgaccttcgacctggcgctgacc
gacaagctgtccttgttcgtcgaggacatgcggcgcggcggggtcgagtgcctgccgccg
tcggtcaacgccagcggcgcctgcttcactgttgaagagggcggtgtccgctacgcgctt
ggcgcgctcaagggcgtcggggaaaaagcgatggaggcgctggttgccgagcgcgagtcg
ggcggcgctttttcaaccatcgataatttcgcggagcgggtcgatcctcgaatactcaac
cgacgccagatcgaaagcttggcaggcggcggcgcattcgacgagctggccgccaatcgg
gcgagcgtgttcgcttcggcggagaccattcttgcccacgcggcgagcgccgccgatcag
cggaccagcgggcagggggggctgttcggcgccggggatgccagcgtcccgccgatccgc
ctggtcgacatgcaatggagcctgtcgcagcgcatggcggctgagcgggaagccttcggt
ttctatttctcggcccacccggtggatgcgcacgcgcacttgctggccgcgtacaaggtg
aagcgctttggcgacctggcttccgtacccattccggccgaggagcgagtgaccgcgacc
atggcggcgctgatcgaggacacgcggtggcgcacatcggccaagggccgacgctaccag
atggcgacggtcagcgatccttccggccagttcgttgcgaccgccttcgatgacgaggcg
accattgcgctggagcaagcggcgcagtccggtgcctgtgggctactcaccgtggagctc
gaccgccgccctggcgacgaattgccacgcgtgacgatcaagcgcttccagccgctagag
acgctggcgaagcggacccggctccatctgaccatccgcgtgagcgatccggctttcatg
cctgcaattgccgcggagctgaaccgcgcgcggggggggactggcgttgtgcgcctgatc
gtcggtacgcaaacggccgacgaggcagtgatcctcgccggccgcgatttcatgctggat
gcggagcttgccgcccgaatcaccgtgttggcgggcgaatccagcgtcgacctgtcggtg
caggagccgccgaagctcgccctggtcggttag
DBGET
integrated database retrieval system
