Sphingomonas sinipercae: G7078_09305
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Entry
G7078_09305 CDS
T07461
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ssin
Sphingomonas sinipercae
Brite
KEGG Orthology (KO) [BR:
ssin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssin03016
]
G7078_09305 (rnd)
Enzymes [BR:
ssin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
G7078_09305 (rnd)
Transfer RNA biogenesis [BR:
ssin03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G7078_09305 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QIL02957
UniProt:
A0A6G7ZPN9
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All DBs
Position
1787543..1788730
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AA seq
395 aa
AA seq
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MKIHPLITTTAELEALVGRLAQHPFVAVDTEFMRENTYWPDLCLIQVASPDEAAAIDPKA
DIDLKPLLDLMVANEDVLKVFHAGGQDLEIIHNLTGKTPHPLFDTQIAAMALGHGEQVGY
SSLIESMLGHALDKGARFTDWGRRPLDKRQIDYAIADVTHLAKVFPRLVEKLRKTGRGAW
LDEEMEKLADPSSFAFEAEDAWKRLRVPSRNAAVLGRLKAIAAWRETEARSKNLPRGRIV
KDDTLGELAAHPPKSQDDLGKIRGLSAGWRSNDIGQRLMQAIEASSPLEPDEMPDREPRR
PGLTKDGVLVADLLKLLLKIRSKETGVASKLIARSDDLEALAAGVRKDIKILSGWRFEEF
GRDALDLVEGRLGFAVQNGKLKMSRLVQEEPSETA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccatcccctgatcacgactaccgccgagcttgaagctcttgtcggccgcctt
gcgcagcatccgttcgtcgccgtcgacaccgagttcatgcgcgaaaacacctattggccc
gacctctgcctgatccaggtcgcaagcccggacgaggcggcggcaatcgaccccaaggcc
gacatcgacctgaagccactgctcgacctgatggtcgctaatgaagacgtgctgaaagtc
ttccacgccggcgggcaggacctggaaatcatccacaacctcaccggcaagaccccccat
cccttgttcgacacgcagattgcggcgatggcgctcgggcacggcgagcaggtcggttac
tccagcctgatcgaatcgatgctcggccatgcgctcgacaagggcgcgcgcttcaccgac
tggggccgccgcccgctcgacaagcgccagatcgattatgcgatcgccgacgtcacgcat
ctcgccaaggtcttcccgcgcctggtcgagaaattgcgcaagaccgggcgcggcgcctgg
ctcgacgaggaaatggaaaagctcgccgacccgtcaagcttcgccttcgaggccgaagat
gcgtggaagcgcctgcgagtccccagccgcaacgccgccgtgctcggccggctcaaggcc
atcgccgcctggcgcgagacggaggcgcggtcgaagaacttgccgcgcggccggatcgtc
aaggacgatacgctgggcgaactcgccgcccacccgcccaaatcgcaggacgacttgggc
aagatccgcgggctttccgcgggatggcgaagcaacgacatcggccagcggctgatgcag
gcgatcgaggcgtcgagcccgctcgagccggacgaaatgcccgaccgcgagccgcgccgc
ccgggcctgaccaaggacggcgtgctggtcgccgacctgctcaagctgctgctcaagatc
cgctccaaggaaaccggcgtcgcctccaagctgatcgcccggagcgacgatctggaagcg
ctcgctgccggagtccgcaaggacatcaagatcctcagcggctggcgcttcgaggaattc
ggccgcgacgcgctcgacctggtcgaaggccgccttggcttcgctgtccagaacggcaag
ctgaagatgagccggctggtgcaggaagagcccagcgagacggcctga
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