Sphingomonas sinipercae: G7078_10185
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Entry
G7078_10185 CDS
T07461
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssin
Sphingomonas sinipercae
Pathway
ssin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G7078_10185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssin03021
]
G7078_10185
03400 DNA repair and recombination proteins [BR:
ssin03400
]
G7078_10185
Enzymes [BR:
ssin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G7078_10185
Transcription machinery [BR:
ssin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G7078_10185
DNA repair and recombination proteins [BR:
ssin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G7078_10185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
IDH
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QIL03109
UniProt:
A0A6G7ZQA6
LinkDB
All DBs
Position
complement(1965834..1966904)
Genome browser
AA seq
356 aa
AA seq
DB search
MAVNAKNWQELKKPNALERKQAGGDARRRGVFVAEPLERGFGMTLGNSLRRVLLSSLQGA
AVTSIKIEGVLHEFSSLTGVREDVTDIVLNVKQIALRMEGEGPKRLQLSATGPTEVTAGM
ISTSGDIEVTNPDLVICHLDEGATLNMELTADIGKGYVAAAANRPADAPIGLIPVDALYS
PVRQVAYKVENTRVGQELDYDKLTLTIETDGTVSPEDALGYAARILQDQLQLFVHFDDSQ
VRTAAPSMIGTAVPMAADTPTDTNQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQ
KTEAEMLRTPNFGRKSLNEIKEVLASMGLRLGMDIPGWPPENIEEMAKKLEQEMLG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcaacgcgaagaactggcaggaactcaagaagccgaacgcgctggagcgcaag
caggccggcggcgatgcccgccgccgcggcgtgttcgtcgccgaaccgctcgagcgcggc
tttggcatgacgctcggcaactcgctgcgccgcgtgctgttgagctcgctccagggcgcc
gccgtcacctcgatcaagatcgaaggcgtgctccacgaattctcgtccctcaccggcgtt
cgtgaggacgtcaccgacatcgtcctgaacgtgaagcagatcgcgctgcgcatggaaggc
gaaggccccaagcggctgcagctttcggcgaccggcccgaccgaagtcaccgccggcatg
atctcgaccagcggcgacatcgaagtcaccaaccccgacctcgtcatctgccacctcgac
gagggcgcgacgctcaacatggagctgaccgccgacatcggtaagggctatgtcgccgcc
gccgccaaccgcccggccgacgcgccgatcggcctgatcccggtcgacgcgctgtacagc
ccggtccgccaggtcgcctacaaggtggaaaacacccgcgtcggccaggaactggactat
gacaagctgacactgaccatcgagaccgacggcacggtgagcccggaagacgcgctcggc
tacgccgcgcggatcctccaggaccagctgcagctgttcgtccacttcgacgacagccag
gttcgcaccgctgcgccgtcgatgatcggcaccgcagtgccgatggccgcggacacgccg
accgacaccaaccagctcaaccgctacctcctcaagaaggtcgacgagctggaactgtcg
gtgcgcagcgccaactgcctgaagaacgacaacatcatctacatcggcgacctggtgcag
aagacggaagcggaaatgctccgcaccccgaacttcggccgcaagtcgttgaacgagatc
aaggaagtgctcgccagcatgggccttcgcctcggcatggatatccccggatggccgccc
gagaacatcgaagagatggcgaagaagctcgagcaggaaatgctcggctaa
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integrated database retrieval system
