Streptomyces sirii: WAB15_09120
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Entry
WAB15_09120 CDS
T11107
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
ssir Streptomyces sirii
Brite
KEGG Orthology (KO) [BR:
ssir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssir03019
]
WAB15_09120
Enzymes [BR:
ssir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
WAB15_09120
Messenger RNA biogenesis [BR:
ssir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
WAB15_09120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WXK76130
UniProt:
A0ABZ2QI31
LinkDB
All DBs
Position
complement(2007608..2010427)
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AA seq
939 aa
AA seq
DB search
MTEDMSPAERYAAAKLRAAEQATALAPFREMYDFDLDPFQVEACQALEAGKGVLVAAPTG
SGKTIVGEFAVHLALEQGRKCFYTTPIKALSNQKYQDLVKRYGADKVGLLTGDNSVNSEA
PVIVMTTEVLRNMLYSGSQSLVGLGHVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTAVIVSEHRPVPLWQHVLAGRRIYDLFEERDGRSGGGRRE
VNPDLERLARMENSRPTFGRDKRRGRNLREADRERERRQRARIWTPSRPEVIDRLDNEGL
LPAITFIFSRAGCEAAVQQCLYSGLRLNDQEGREEVRRIVEARTAGIPDTDLHVLGYYEW
LEGLERGIAAHHAGMLPTFKEVVEELFVKGLVKAVFATETLALGINMPARSVVLEKLVKW
NGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGMNPGALAGLAGTRTYPLRSSFK
PSYNMAVNLVSQFGRHRSRELLEMSFAQFQADKSVVGISRQVQKNEEGLTGYRGSMTCHL
GDFEEYSRLRRELKDRETELAKQGAAQRRVAAAAALEKLKPGDVIHVPTGKYAGLALVLD
PGMPSGRTNGHRGYDAQDGPRPLVLTAERQVKRLASMDFPVPVEALDRMRIPKSFNARSP
QSRRDLASALRTRAGHIVPSRHRRARSEAADDREIARLRTALRAHPCHGCDEREDHARWA
ERYHRLLRDTRQLERRIEGRTNTIARTFDRICALLTELDYLEGDTVTDEGRRLARLYGEL
DLLASECLREGVWEGLGPAELAACASALVYEARQADDAAAPKLPSGKARDALGEMVRIWG
RLDALEEDHKISQAEGVGQREPDLGFAWAAYRWTSGFGLDEVLREAEMPAGDFVRWCKQL
VDVLGQIAAAAPPEGSVARTARRAMDGVLRGVVAYSSVG
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggacatgtcccctgctgagcgctatgccgccgccaagctccgggcggccgag
caggccaccgcactcgccccgttccgagagatgtacgacttcgatctggatccgttccag
gtcgaggcatgccaggccctggaggccggcaaaggtgtgctcgtcgcggcccccaccggg
tccggcaagacgatcgtcggcgaattcgccgtccacctggccctggagcagggccgcaaa
tgcttctacaccacgcccatcaaggccctgtccaaccagaagtaccaggatctggtcaag
cgttacggcgcggacaaggtcggtctgctgaccggcgacaacagcgtcaactccgaggcg
ccggtgatcgtgatgaccaccgaagtgctgcggaacatgctgtactccggctcccagtcg
ctggtcggcctcggccatgtggtcatggacgaggtgcactacctctccgaccgcttccgc
ggcgccgtatgggaagaggtgatcatccatctccccgagtcggtgacgctggtgtcactg
tcggcgacggtctccaacgccgaggagttcggcgactggctggacacggtccgcggcgac
accgccgtgatcgtctccgagcaccgcccggtgccgctgtggcagcacgtcctggccggc
cgccggatctacgacctgttcgaggagcgggacggccggagcggcggcggccgccgcgag
gtcaaccccgacctggagcggctggcgcggatggagaacagccggccgaccttcggccgg
gacaagcgccggggccgcaatctgcgcgaggcggaccgcgagcgggagcggcgccagcgc
gcccggatctggacgccgagccggcccgaggtcatcgaccgcctggacaacgagggcctg
ctgcccgcgatcaccttcatcttcagccgggccggctgtgaggccgccgtccagcagtgc
ctctattcgggcctgcggctcaacgaccaggagggccgtgaggaggtccgccgcatagtg
gaggcgcggacggccgggatcccggacaccgatctccatgtgctgggctactacgagtgg
ttggagggcctggaacggggcatcgcggcgcaccacgccggcatgctgccgaccttcaag
gaggtcgtcgaggagctgttcgtcaagggcctggtcaaggccgtcttcgccaccgagacg
ctggccctgggcatcaacatgcccgcgcggtcggtggtgttggaaaagctcgtgaagtgg
aacggcgagcagcacgccgacatcacccccggcgagtacacccagctgaccggccgggcc
ggtcgccgcggtatcgacgtcgagggccatgcggtggtgctgtggcagcgggggatgaac
cccggtgcgctggccggcctcgccgggacgcgtacgtatccgctgcgctcctccttcaag
ccgtcgtacaacatggcggtcaacctcgtctcccagttcggccggcaccgctcgcgggag
ctgctggagatgtccttcgcgcagttccaggccgacaagtcggtggtcgggatatcgcgc
caggtgcagaagaacgaggaggggctgaccggctaccgcggctcgatgacctgccatctc
ggggacttcgaggagtactcccggctgcggcgggagctgaaggaccgggagacggagctg
gccaagcagggcgcggcgcagcgccgggtggcggccgcggccgccctggagaagctcaag
cccggcgatgtcatccatgtgcccaccgggaagtacgcgggcctggcgctggtcctggac
cccggtatgccctcggggcggacgaacggccaccgcggctacgacgcccaggacggcccc
cggccgctggtgctgaccgccgagcggcaggtcaagcggctggcctcgatggacttcccg
gtgccggtcgaggcgttggaccggatgcggatccccaagtcgttcaacgcccgcagcccg
cagtcgcgccgcgatctggcgtccgcgctgcggacgagggcgggccatatcgtgccgtcg
cggcatcgccgggcccgttcggaggcggccgacgaccgcgagatcgcccggctccgtacg
gccctgcgcgcgcacccctgccatggctgcgacgagcgcgaggaccacgcccgctgggcg
gagcgctaccaccgactgctgcgcgacacccggcagttggagcgccggatcgagggccgg
acgaacaccatcgcccgcaccttcgaccggatctgcgcgctgctgaccgagctggactac
ctcgaaggcgacacggtcaccgacgagggacgacggctggcccggctctacggcgagctg
gatctgctggcgagcgagtgcctgcgcgagggcgtctgggagggactcggcccggcggag
ctggcggcctgtgcctcggcgctggtgtacgaggcgcgccaggcggacgacgcggcggcg
cccaagttgccgtccggcaaggcccgggacgccctgggcgagatggtccggatctggggt
cggctggacgccctggaggaggaccacaagatcagccaggcggagggcgtcggtcagcgc
gagccggacctcggcttcgcctgggcggcgtaccgctggacgtccggcttcggcctcgac
gaggtgctccgcgaggccgagatgccggccggcgacttcgtccgctggtgcaagcagctg
gtcgacgtcctcggccagatagcggcggccgccccgcccgagggctcggtggcgcggacg
gcccgccgggcgatggacggtgtgctgcggggcgtggtggcgtactcgtccgtgggctga
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