Streptomyces sirii: WAB15_14170
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Entry
WAB15_14170 CDS
T11107
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ssir Streptomyces sirii
Pathway
ssir02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssir00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WAB15_14170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssir03021
]
WAB15_14170
Transcription machinery [BR:
ssir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WAB15_14170
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
KORA
Motif
Other DBs
NCBI-ProteinID:
WXK77052
UniProt:
A0ABZ2QKK2
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All DBs
Position
complement(3137194..3138510)
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AA seq
438 aa
AA seq
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MPESSERGRSGRTPPESPAEPLSTYGTGGGSAATVPDPSAASAAITLEVAPVQTQTLADA
PTAAPPAAEPQREPALEPVAVPQQAEPPAAEMYLGEIAPEPGPGPEPEVEQEPESEPEPA
LEREPAPSPRPDTAAGPSSDLFRQYLREIGRIPLLTAAEEVELARRVEAGLFAEEKLTNT
PDLSSQLAYDLDKLVVLGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIR
AVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQER
GYEPTPEEVATHLDLTEERVSEVLRLAQEPVSLHAPVGEEEDVALGDLIEDGDAASPVES
AAFLLLREHLDAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKT
LNKLRDHAFADQLRGYLD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagtcctcggagcgcgggcggtccggtcgtacgccaccggagtcccccgcggaa
ccgctctcgacgtacgggacgggaggcggctcggccgctaccgtgcccgacccttctgcc
gcctcagcagcgatcaccctggaggtcgcccccgtgcagacccagaccctcgccgatgcg
ccgaccgctgcgcccccggccgccgagccgcagagggagccggccctggaaccggtcgcc
gtgccgcagcaggccgagccccccgccgccgagatgtacctcggggagatcgccccggaa
ccgggaccgggaccagagccggaagtggaacaagaaccggaatcggaaccggaaccggca
ctcgaacgggagccggcgccatcgccccgccccgacaccgccgccggcccgtcctccgac
ctcttccgccagtacctccgcgagatcggccggatcccgctgctcaccgccgccgaggag
gtcgagctcgcccgccgggtggaggccggcctcttcgccgaggagaagctcaccaacacc
cccgacctgtcgtcccaactcgcctacgacctcgacaagttggtggtcctcggccggatg
gccaaacgccgcctgatcgaggccaacctccgcctggtggtctccgtcgccaagcgctac
gtcggccgcggactgaccatgctcgacctcgtccaggagggaaacctcggactgatccgc
gccgtcgagaagttcgactacgcccgcggctacaagttctccacctacgccacgtggtgg
atccgccaggcgatgtcccgcgccctcgccgaccaggccaggaccatccgcgtcccggtc
cacgtcgtcgagctgatcaaccgggtggtgcgcgtccagcgccggatgctccaggagcgc
ggctacgaaccgacgcccgaggaggtcgccacccacctcgacctgaccgaggaacgcgtc
agcgaggtgctgcgcctggcgcaggagccggtctcgctgcacgctcccgtcggcgaggag
gaggacgtcgccctcggcgacctcatcgaggacggcgacgccgcctcacccgtcgaatcc
gccgcgttcctgctgctgcgcgagcacctcgacgcggtgctgtccaccctcggcgaacgc
gaacgcaaggtcgtccagctccgctacgggctggccgacggccgcccccgcacgctggag
gagatcggccggatcttcggggtcacccgcgaacggatacggcagatcgagtccaagacc
ctcaacaaactccgcgaccacgccttcgccgaccagctccgcggctatctcgactga
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