Streptomyces sirii: WAB15_15960
Help
Entry
WAB15_15960 CDS
T11107
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ssir Streptomyces sirii
Pathway
ssir00061
Fatty acid biosynthesis
ssir00071
Fatty acid degradation
ssir01100
Metabolic pathways
ssir01212
Fatty acid metabolism
ssir02024
Quorum sensing
ssir04146
Peroxisome
Module
ssir_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ssir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
WAB15_15960
00071 Fatty acid degradation
WAB15_15960
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
WAB15_15960
09145 Cellular community - prokaryotes
02024 Quorum sensing
WAB15_15960
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssir01004
]
WAB15_15960
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssir04147
]
WAB15_15960
Enzymes [BR:
ssir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
WAB15_15960
Lipid biosynthesis proteins [BR:
ssir01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
WAB15_15960
Exosome [BR:
ssir04147
]
Exosomal proteins
Exosomal proteins of breast milk
WAB15_15960
Exosomal proteins of breast cancer cells
WAB15_15960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
R_equi_Vir
Motif
Other DBs
NCBI-ProteinID:
WXK77371
LinkDB
All DBs
Position
3568420..3570330
Genome browser
AA seq
636 aa
AA seq
DB search
MRDISVPALAAPLRTGGLADSVFDTAAHQPDFVQLARREDRAPGGWEEVSAKTFRDEIMA
LARGLLAEGVRPGARVALMSRTRYEWTLFSYALWAIGAQLVPVYPTASAEQLRCILNGSA
VTAIVVEHEAHAMTVAEACDEHSRLRRLWQLDLDCVARLTEEGTRLPEADVHRLRHAVTP
RSTAAIVHTSGTSGRPRGCVITHANLAAQCDTLYAGWGGLLAPPGERPSLLAFLPFAGVY
GLMVQVACLRGGVQLAHQPDASSDELLPALASFRPTFLFAVPYVFEKICAHARWAAEQAG
RRRTFDAAMTVAVRYAEALAAEAQGTGRGPDPVLRARHALYDRLVYCRIRELLGGRVATA
VSGGSPLLTELALLFAGIGITVYDGYGLTETSGAITVQPPGKVRFGTVGLPLPGSAVHLA
LDGEVWVRGAVVFAGYLDGGEGTPGSGLYDGWLPTGDLGHLDEEGYLVITGRKKDIIITS
NGKSVAPQGLEQRLCAHPLISQSVVVGDNRPYVTALITLDPEALAHWRRLRGDTGEDGGS
GSGPSPQEQLEAEVRRAVARANASVSRAESIRAFRVLPGEFSQESGLMTPSMKLRRAAIV
RAYAAEIDALYARGEREAPDTRSERRRWAAAGLYAR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgacatcagcgttccggccctggcggctccactgcggaccggcggtctggccgac
tccgtcttcgacaccgccgctcaccagccggacttcgtccagctcgcccgtcgcgaggac
cgcgcgccgggcggctgggaggaggtgtcggcgaagacattccgcgacgagatcatggcg
ctggcaagggggctgctggcggagggcgtccggcccggcgcccgggtcgcgctgatgtcc
cgcacccgctacgagtggacgctgttcagctatgcgctgtgggcgatcggcgcccagctg
gtcccggtctatccgaccgcgtcggccgagcagctgcgctgcattctcaacgggtcggcg
gtgaccgcgatcgtcgtcgagcacgaggcgcacgccatgaccgtggcggaggcctgcgac
gagcactcccggctgcgccggctgtggcagctggacctggactgcgtggcgcggctgacg
gaggagggcacccggctgcccgaggcggatgtgcaccggctgcggcacgcggtcaccccg
cgcagcaccgccgcgatcgtgcacacctcgggcaccagcgggcggccgcgcggctgtgtg
atcacgcacgccaatctcgccgcccagtgcgacaccctctacgcgggctggggcgggcta
ctggccccgcccggcgaacgcccctcgctgctggccttcctgcccttcgcgggcgtctac
gggctgatggtgcaggtggcgtgcctgcgcggcggggtacagctcgcccaccagcccgac
gcgtcctcggacgaactgctgccggccctggcgtcgttccgtccgacgttcctcttcgcg
gtcccgtacgtcttcgagaagatctgcgcgcacgcccggtgggccgcggaacaggcgggc
cggcggcggacgttcgacgcggcgatgaccgtggcggtgcgctacgccgaggcgctcgca
gcagaggctcagggcaccgggcgcggccccgacccggtcctgcgggcccggcacgccctc
tacgaccggctggtgtactgccgcatccgggagctgctgggcggcagggtggccacggcc
gtctccggcggctcaccgctccttacggagctggcgctgctcttcgccggcatcgggatc
accgtctacgacggctacggcctgacggagaccagcggcgcgatcaccgtgcagccgccc
gggaaggtgcggttcgggacggtgggactgccgctgccgggcagcgcggtgcatctggcg
ctggacggcgaggtgtgggtgcgcggtgcggtggtgttcgccggctacctcgacggcggg
gagggcacgccgggcagcgggctgtacgacggctggctgccgaccggcgacctcgggcat
ctggacgaggagggctacctggtcatcaccgggcgcaagaaggacatcatcatcaccagc
aacggcaagagcgtcgccccccagggactggagcagcggctgtgcgcccatccgctgatc
tcgcagtcggtggtggtcggcgacaaccggccgtatgtgaccgcgctgatcaccctggat
ccggaggcgctcgcgcactggcggcggctgcggggcgacaccggcgaggacggcggcagc
ggctcggggccgtcgccgcaggagcagctggaggccgaggtgcggcgggcggtggcccgg
gccaacgcgtcggtgtccagggccgagtcgatccgggcgttccgggtgctgccgggcgag
ttcagccaggagtccgggctgatgacgccgtcgatgaagctgcgcagagcggcgatcgta
cgggcctacgcggcggagatcgacgccctgtacgcgcgcggggagcgcgaggcgcccgac
acccgcagcgagcgccgacggtgggcggcggcaggcctgtacgcgcgctga
DBGET
integrated database retrieval system
