Streptomyces sirii: WAB15_18475
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Entry
WAB15_18475 CDS
T11107
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssir Streptomyces sirii
Pathway
ssir03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssir00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WAB15_18475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssir03021
]
WAB15_18475
03400 DNA repair and recombination proteins [BR:
ssir03400
]
WAB15_18475
Enzymes [BR:
ssir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WAB15_18475
Transcription machinery [BR:
ssir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WAB15_18475
DNA repair and recombination proteins [BR:
ssir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WAB15_18475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WXK77826
LinkDB
All DBs
Position
complement(4158969..4159991)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccgtctctgaccgaagaggtcgtcgacgaataccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctgcgtcgt
acgctcctctcctcgatcccgggtgcggcggtcacgtccatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggccccggcctggtcaccgctgccgacatcgcgcccccggccggtgtcgaggtccacaac
ccggacctggtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctatgtctccgccgtgcagaacaagcaggtgggccaggagatcggc
cggatcccggtcgactcgatctactcgccggtcctcaaggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcggccgcgcgacgccatggcgtccgccggtaagacgctggtcgagctgttcggt
ctggcgcgtgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctcgccgccgacctggcgctgccgatcgaggagctcgagctcaccgttcgttcg
tacaactgcctcaagcgtgagggcatccactccgtgggtgagctcgtggcgcgctccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggcgctcaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgccttcggcgcggacgacgacgcggacgccgggttcgtggagaccgagcagtac
tga
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