Streptomyces sirii: WAB15_28955
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Entry
WAB15_28955 CDS
T11107
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ssir Streptomyces sirii
Brite
KEGG Orthology (KO) [BR:
ssir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssir03032
]
WAB15_28955
03036 Chromosome and associated proteins [BR:
ssir03036
]
WAB15_28955
03400 DNA repair and recombination proteins [BR:
ssir03400
]
WAB15_28955
DNA replication proteins [BR:
ssir03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
WAB15_28955
Chromosome and associated proteins [BR:
ssir03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
WAB15_28955
DNA repair and recombination proteins [BR:
ssir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
WAB15_28955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
WXK79707
UniProt:
A0ABZ2QT30
LinkDB
All DBs
Position
6411304..6411966
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AA seq
220 aa
AA seq
DB search
MNKAQLVEAIADKLGGRQNAADAVDAVLDAVVRAVVTGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKGGEVAVKKAPKGSLTGGTAIKKAA
AKKATAKKAAAKKATTAKKAAAKKTTTAKKVTAKKTTAKKTTAKKATTAKKATTAKKAAT
AKKATAKKTAPAKKATAKKAPAKKATARKTTAKKATARKR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagccattgccgacaagctcggcggccgccagaacgcc
gcggacgcggtcgacgcggtactggacgcagtcgtccgtgcagttgtcaccggcgaccgt
gtttcggtcaccggattcggctcgttcgagaaggtcgaccgtccggcccgttacgcccgt
aacccgcagacgggtgagcgcgtgcgggtcaagaagacctcggtgccgcgtttccgcgcc
ggtcagggcttcaaggacctggtgagcggctcgaagaagctccccaagggcggcgaggtc
gccgtcaagaaggcccccaagggcagcctgaccggcggtacggccatcaagaaggccgcc
gccaagaaggccaccgccaagaaggccgccgcgaagaaggcgaccaccgccaagaaggcc
gcggcgaagaagaccaccacggcgaagaaggtcaccgccaagaagacgacggcgaagaag
accaccgccaagaaggcgaccaccgccaagaaggccaccacggccaagaaggccgccacg
gcgaagaaggccacggcgaagaagaccgcccccgccaagaaggcgacggcgaagaaggcc
cccgccaagaaggccaccgcccgcaagaccaccgcgaagaaggccaccgcccgcaagcgg
taa
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