Streptomyces sirii: WAB15_29045
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Entry
WAB15_29045 CDS
T11107
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ssir Streptomyces sirii
Pathway
ssir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
WAB15_29045 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssir03019
]
WAB15_29045 (rnc)
03009 Ribosome biogenesis [BR:
ssir03009
]
WAB15_29045 (rnc)
03036 Chromosome and associated proteins [BR:
ssir03036
]
WAB15_29045 (rnc)
Enzymes [BR:
ssir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
WAB15_29045 (rnc)
Messenger RNA biogenesis [BR:
ssir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WAB15_29045 (rnc)
Ribosome biogenesis [BR:
ssir03009
]
Eukaryotic type
90S particles
RNase
WAB15_29045 (rnc)
Prokaryotic type
rRNA processing factors
WAB15_29045 (rnc)
Chromosome and associated proteins [BR:
ssir03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
WAB15_29045 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WXK79723
UniProt:
A0ABZ2QT53
LinkDB
All DBs
Position
6427733..6428551
Genome browser
AA seq
272 aa
AA seq
DB search
MSDATSTSRSRGDEPTPADTASSHTLLEGRLGYKLESALLVRALTHRSYAYENGGLPTNE
RLEFLGDSVLGLVVTDTLYRIHPDLPEGQLAKLRAAVVNSRALAEVGRGLDLGAFIRLGR
GEEGTGGRDKASILADTLEAVIGAVYLDQGLDAAGELVHRLFDPLIEKSSSLGAGLDWKT
SLQELTATEGLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAW
RAIRAAADEAAKAAASGDDASQEAGDGSSSAH
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgccacatcgacttcccgctcacgcggggatgaaccgactccggcggacacg
gcctcgtctcacacgcttctggaagggcggctcgggtacaagctcgagtccgcccttctg
gtgcgtgcgctgacgcaccgctcgtacgcatacgagaacggcggtctgcccaccaacgag
cggctcgagttcctcggggactcggtgctcggcctggtggtcaccgacacgctgtaccgc
atccaccccgacctgccggagggccagctggccaagctccgggccgcggtggtcaactcg
cgtgcgctcgccgaggtgggccgcggcctcgacctcggcgccttcatccgcctcggccgg
ggcgaagagggcacgggcggcagggacaaggcatccatcctcgccgacaccctcgaagcg
gtgatcggcgcggtctatctcgaccagggcctcgacgcggccggcgagctggtgcaccgg
ctcttcgacccgctcatcgagaagtcctccagcctgggcgcgggcctggactggaagacc
agcctccaggaactcaccgcgaccgaaggtctcggcgtcccggagtacctggtcaccgag
accggcccggaccacgagaagacctttactgctgccgcccgcgtcggtggtgtctcgtac
ggcaccggcaccggccgcagcaagaaggaggccgagcagcaggcggccgagtccgcatgg
cgcgcgatccgcgccgcggcggacgaggcggccaaggcggcggcttccggtgacgacgcg
tcgcaggaggccggcgacggctcgtcgtcggcacactga
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