Streptomyces sirii: WAB15_29635
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Entry
WAB15_29635 CDS
T11107
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ssir Streptomyces sirii
Pathway
ssir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WAB15_29635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssir03019
]
WAB15_29635
03016 Transfer RNA biogenesis [BR:
ssir03016
]
WAB15_29635
Enzymes [BR:
ssir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WAB15_29635
Messenger RNA biogenesis [BR:
ssir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WAB15_29635
Transfer RNA biogenesis [BR:
ssir03016
]
Prokaryotic type
tRNA degradation factors
WAB15_29635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
KH_KhpA-B
CdsD_C
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
WXK79829
UniProt:
A0ABZ2QTF3
LinkDB
All DBs
Position
6566189..6568411
Genome browser
AA seq
740 aa
AA seq
DB search
MENETHYAEAVIDNGSYGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKNPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLPDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEVVAAGLEAAKPFIKVLC
KAQSDLAAKAAKPVGEFPVFLEYQDDVLEALTKAVKDELTQALTIAGKQDREAELDRVKG
LAAEKLLPEFEGREKEISAAYRSLTKTLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLFNAGVP
LKAPVAGIAMGLISQEIDGETHYVTLTDILGAEDAFGDMDFKVAGTKTFVTALQLDTKLD
GIPASVLAAALKQARDARMHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLAVGAKVQVEIAEIDQRGKLSL
IPVIEEEDAAKADTKDDTDK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaagccgtgatcgacaacggcagctacggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcctccaagaacccgaaggaccag
ctggacttcttcccgctgaccgtcgacgtcgaggagcggatgtacgcagccgggaagatc
cccggctccttcttccgtcgtgagggccgcccctccgaggacgccatcctcacctgtcgc
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctctacgacgtggtcgccatcaacgcc
gcctcctgctccacgcagctggccggcctgcccttctccggccccatcggcggtacccgc
gtcgccctgatcaagggccagtgggtggcgttcccgacccacaccgagctcgaggacgcc
gtcttcgacatggtcgtggccggccgcgtcctcccggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctcgtcaaggacggcgccgaggccccg
accgaagaggtcgtcgccgccggtctcgaggccgcgaagccgttcatcaaggtcctgtgc
aaggcgcagtcggacctcgccgccaaggccgcgaagcccgtcggcgagttcccggtcttc
cttgagtaccaggacgacgtcctggaggcgctgaccaaggccgtcaaggacgagctcacg
caggcgctgaccatcgccggcaagcaggaccgcgaggccgagctggaccgcgtcaagggc
ctggccgccgagaagctgctgccggagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctgaccaagaccctggtccgtgagcgcgtcatcaaggagaagaagcgcatc
gacggccgcggcgtcacggacatccgtacgctcgccgccgaggtcgaggcgatcccgcgg
gtgcacggctccgccctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggtgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggcgcgctggccgagcgcgccatcgtgccggtgctgccg
acccgcgaggagttcccgtacgcgatccgtcaggtctccgaggccctcggctccaacgga
tccacgtccatgggctcggtctgcgcctcgaccatgtcgctgttcaacgccggtgtgccc
ctcaaggccccggtcgcgggcatcgccatgggcctgatctcccaggagatcgacggcgag
acccactacgtcaccctcaccgacatcctcggtgcggaggacgccttcggtgacatggac
ttcaaggtcgccggcacgaagaccttcgtgaccgccctccagctggacaccaagctggac
ggcatcccggcctccgtcctggccgcggccctcaagcaggcccgcgacgcgcggatgcac
atcctggacgtgatgaacgaggcgatcgacgttccggacgagatgtccccgaacgcgccg
cggatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
acgatctacatcggtgccgccgacggcccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtcaag
accaccaccttcggtgcgttcgtctccctgctcccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctcgcg
gtgggcgccaaggtccaggtcgagatcgccgagatcgaccagcgcggcaagctctccctg
atccccgtgatcgaggaggaagacgccgctaaggccgacacgaaggacgacaccgacaag
tga
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