Streptomyces sirii: WAB15_29735
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Entry
WAB15_29735 CDS
T11107
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ssir Streptomyces sirii
Brite
KEGG Orthology (KO) [BR:
ssir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssir03009
]
WAB15_29735 (rimO)
Enzymes [BR:
ssir01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
WAB15_29735 (rimO)
Ribosome biogenesis [BR:
ssir03009
]
Prokaryotic type
ribosomal protein modification factors
WAB15_29735 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WXK79845
LinkDB
All DBs
Position
6597224..6598717
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AA seq
497 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEEAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYTDISDRLQTIL
SGGNVEAHAPRDRRKLLPISPAERQQADGVALPGHGDALASAPEDLPEGVAPRSGPRAPL
RRRLDSHPVASVKLASGCDRRCTFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEIMLV
SENNTSYGKDLGDIRLLETLLPELAAVDGIERIRVSYLQPAEMRPGLIDVLTGTDKVAPY
FDLSFQHSAPGVLRAMRRFGDTDRFLDLLAQIRTKAPQAGARSNFIVGFPGESESDLAEL
ERFITEARLDAIGVFGYSDEDGTEAASYEDKVDPDVVAERLARVSRLAEELTAQRAEERI
GETVRVLVDRIDDEDGVVGRGAHQAPETDGSTLLLSTGQVLLPGRMVEAKVVGSEGVDLV
AEVLSVDGTGCTEEAGR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcacccttggctgcgcccgtaacgaggtggac
tcggaggaactcgccggccgcctggcggcggacggctgggagctcgtcgaggaagccgcc
gatgccgatgtcgccgtcgtcaacacctgtggcttcgtcgaggccgccaagaaggactcc
gtcgatgccctgctggaagccaacgatctgaaggatcatggcagaacccaggccgtagtg
gccgtcggctgcatggccgagcgctacggcaaggagctggccgaggcgctgcccgaggcc
gacggcgtgctcggcttcgacgactacaccgacatctccgaccgcctgcagacgatcctg
agcggcggaaacgtcgaggcccacgcgccgcgcgaccgccgcaagctgctgccgatcagc
ccggccgagcgccagcaggccgacggagtggcgctgcccgggcacggggacgcgctggcc
tcggcccccgaggacctgcccgagggcgtcgcgccgaggtccggaccgcgggcgccactg
cgccgccgcctggactcccatcccgtcgcctcggtgaagctggcctccggctgcgaccgc
cgctgcacgttctgcgccatcccgtccttccgcggctccttcatctcccgccggccctcc
gacgtgctcggggagacgcgctggctggccgagcagggcgtcaaggagatcatgctggtc
tccgagaacaacacctcctacggcaaggacctcggcgacatccggctgctggagacgctg
ctgccggagctggcggccgtcgacggcatcgagcggatccgggtcagctacctgcagccg
gccgagatgcggcccgggctgatcgacgtgctgaccgggaccgacaaggtcgcgccgtac
ttcgacctgtccttccagcactccgcgcccggggtgctgcgggcgatgcggcgcttcggc
gacaccgaccgcttcctggacctgctggcgcagatccgcacgaaggcgccgcaggccggt
gcccgctccaacttcatcgtcggcttccccggggagagcgagagcgacctggcggagctg
gagcgcttcatcaccgaggcccggctcgatgccatcggcgtcttcggctactccgacgag
gacggcaccgaggccgcctcgtacgaggacaaggtcgatccggacgtggtcgccgagcgg
ctggcgcgggtgtcgcggctggccgaggagctgaccgcgcagcgcgccgaggagcggatc
ggcgagacggtgcgggtgctggtcgaccggatcgacgacgaggacggcgtcgtcgggcgg
ggtgcgcaccaggcgccggagaccgatggcagcaccctgctgctgtcgaccggccaggtg
ctgctgcccggtcgtatggtcgaagcaaaggtcgtggggagcgagggcgtggacctcgtg
gccgaggtgctgtcggtggacggcacggggtgtaccgaggaggcgggcagatga
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