Streptomyces sirii: WAB15_32800
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Entry
WAB15_32800 CDS
T11107
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ssir Streptomyces sirii
Pathway
ssir00300
Lysine biosynthesis
ssir00470
D-Amino acid metabolism
ssir01100
Metabolic pathways
ssir01110
Biosynthesis of secondary metabolites
ssir01120
Microbial metabolism in diverse environments
ssir01230
Biosynthesis of amino acids
Module
ssir_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ssir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WAB15_32800
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WAB15_32800
Enzymes [BR:
ssir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
WAB15_32800
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Matrix_Pneumo_C
Motif
Other DBs
NCBI-ProteinID:
WXK80410
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All DBs
Position
7376555..7377823
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AA seq
422 aa
AA seq
DB search
MADTSATVQGLAVTDLAEEFGTPFFLYDADRLERDYREVRRLLHPGADLFFSLKANPNVS
VCAVLGALGSGAEVSSLAELRTALWAGIAPQDVIFLGPGKTPREIEACVRTDLRAVVCES
PAELRRLERAARDAGRTDVPVLLRINPDFTTKGSGLSMGGKPRQFGMDAGLLREQRHRLH
ELRHLRIRGFHAYMGTRFLRHEDIVHNTREILRLATELAAELDLPCELVDIGGGFGVAYF
DNETDLDLPALAAGVDDVVGDFLQAHPGSRVICELGRYLTARCGTYVSRVLDVKESMGTR
FAVTDGGTHHHMAAVGVGSFVKRNFPMRALTRPAGGEQPYTVTGPLCTPNDVLGKNVLLP
PLEPGDLIGVERSGAYGPSASPGLFLSHGFPAEVMVRAGRAHLVRVRDTVEDLLSRQRLI
PM
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacatcagcaacggtgcagggcctcgccgtcaccgacctcgccgaggagttc
ggcacccccttcttcctctacgacgcggaccgcctcgaacgcgactaccgggaggtgcgc
cggctgctccaccccggcgcggacctgttcttctccctcaaggccaacccgaacgtcagc
gtgtgcgccgtgctcggcgcgctgggctccggcgccgaggtctcctcgctggcggaactc
aggaccgcgctgtgggccggcatcgcgccgcaggacgtcatcttcctggggcccggcaag
accccgcgcgagatcgaggcctgtgtacgcaccgatctgcgtgccgtcgtctgcgagtcg
ccggcggagctgaggcggctggagcgggcggcacgggacgcgggccgcaccgacgtgccg
gtgctgctgcgcatcaacccggacttcaccaccaagggttcggggctctcgatgggcggc
aagccccgccagttcggcatggacgcaggcctgctgcgcgaacagcggcaccggctgcac
gaactgcggcacctgcggatacgcggcttccacgcctatatggggacccgcttcctgcgg
cacgaggacatcgtccacaacacccgggagatcctgcggctggcgacggagctcgccgcc
gaactggacctgccctgcgagctcgtcgacatcggcggcgggttcggggtggcctacttc
gacaacgagacggacctggacctgccggccctcgcggccggtgtcgacgacgtcgtcggc
gacttcctccaggcgcaccccggctcccgggtgatctgcgaactgggccgctacctcacc
gcgcggtgcggcacctacgtcagccgggtcctggacgtcaaggagtcgatgggcacccgc
ttcgccgtcacggacggcggcacccaccaccacatggccgccgtcggcgtgggcagcttc
gtcaaacgcaacttccccatgcgcgcgctcacccggcccgccgggggcgagcagccctac
acggtcaccggcccgctgtgcacaccgaacgacgtgctcggcaagaacgtcctgcttccc
ccgctcgaacccggcgacctgatcggggtcgagcggtccggggcctacggcccctccgcc
tcccccggactgttcctcagccacgggttccccgccgaggtcatggtccgtgccggccgc
gcccatctggtgcgggtccgcgacacggtggaggacctgctgagccggcaacggctcatc
cccatgtga
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