Streptomyces sirii: WAB15_37260
Help
Entry
WAB15_37260 CDS
T11107
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ssir Streptomyces sirii
Pathway
ssir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WAB15_37260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssir03000
]
WAB15_37260
03400 DNA repair and recombination proteins [BR:
ssir03400
]
WAB15_37260
Enzymes [BR:
ssir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
WAB15_37260
Transcription factors [BR:
ssir03000
]
Prokaryotic type
Helix-turn-helix
AraC family
WAB15_37260
DNA repair and recombination proteins [BR:
ssir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WAB15_37260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
DUF6918
Motif
Other DBs
NCBI-ProteinID:
WXK81208
LinkDB
All DBs
Position
8376991..8378538
Genome browser
AA seq
515 aa
AA seq
DB search
MNEDSRYEAVRSRDARFDGAFFFAVSTTGIYCRPSCPATTPRRRNVSFFPTSAAAQGSGF
RACRRCRPDAVPGSAEWNARADVVGRAMRLIGDGVVDREGVSGLAARLGYSARQVQRQLA
AELGAGPVALARAQRAHTARVLLQTTDLQVAEVAFAAGFASVRQFNDTIKEIYALTPSAL
RTARPGKAPRRGPTIPPATPGVLPLRLAYRGPYAAREIFDHLQRRAITGVEEVTGEPGAR
TYRRTLRLPNGPGVAEVDESPGAGWLECRLHLTELRDLTTASQRVRRLFDLDADPYAVAE
RLAADPALAPLVDQRPGLRSPGTPAPHELAIRAVLGQQISVTAGRTLGDALVAAYGEPLP
EPAGGLTHLFPRPEDLAQTSLAALGMPEQRRNTLRTLSTALADGTLTLDSGADRDEVERR
LLDLHGIGPWTAGYIRMRALADPDVLLSGDAAVLAGMRRAGAPTDDLTDRAQAWRPWSSY
AMHHFWNAPAAAEEPRHRGTAGTRTEPSPQTDPRP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggacagcaggtacgaggcggtgcgcagcagagacgccaggttcgacggtgcg
ttcttcttcgccgtgtccacgacggggatctactgccggccgagctgcccggcgaccacg
ccccggcggcgcaacgtcagcttcttcccgacctcggcggccgcgcagggctcgggattt
cgcgcctgccgccgctgtcggcccgacgcggtgcccggttcggccgagtggaatgcccgc
gccgatgtcgtcggccgcgccatgcggctgatcggcgacggggtggtggaccgggagggc
gtgtccggactggccgcgcggctcggctacagcgcgcggcaggtccagcggcagctggcc
gcggagctgggcgcggggccggtggcgctggcacgggcacaacgcgcccacaccgcccgg
gtcctgctgcagaccaccgacctgcaggtggccgaggtcgccttcgcggccgggttcgcc
agcgtgcgccagttcaacgacaccatcaaggagatctacgcgctcaccccgagtgcgctg
cgcaccgcccgtcccgggaaggcgccccgacgcggcccgacgatcccgcccgccaccccc
ggcgtattgccgctacggctggcctaccgcggaccgtacgccgcacgggagatcttcgac
cacctccagcgccgcgcgatcaccggcgtcgaggaggtgaccggcgagcccggagcccgt
acctaccggcgcaccctgcgcctgccgaacggacccggtgtcgccgaggtcgacgagtcg
cccggagcgggctggctggagtgccggctgcacctgaccgagctgcgcgatctcaccacc
gcgagccagcgggtgcgccgcctcttcgacctggacgccgatccgtacgcggtggccgag
cggctcgccgcggacccggcgttggcgccgctggtggaccagcgccccgggctgcgctcc
ccgggcacacccgccccgcacgagctcgcgatccgcgcggtcctgggccagcagatctcg
gtcaccgcgggccgcaccctcggcgacgcgctggtcgccgcctacggggaaccgctgccc
gaaccggcgggcgggctcacccacctcttcccgcgtcccgaggacctggcgcagacctcg
ctcgccgcgctcggcatgcccgagcagcggcggaacaccctgcgcaccctcagcaccgcg
ctcgccgacggcaccctcaccctggactccggggcggaccgcgacgaggtcgagcgccgg
ctcctcgacctgcacggcatcggcccctggaccgccggctacatccggatgcgcgcactg
gcggaccccgatgtgctgctgtccggcgacgcggccgtactggccggaatgcgccgggcc
ggcgccccgacggacgatctgacggaccgtgcgcaggcctggcgcccgtggagctcctac
gcgatgcaccacttctggaacgcgccggccgcagcggaggagccccggcaccgcggcacc
gccggtacccggaccgaaccgtctccgcagaccgacccacgtccgtag
DBGET
integrated database retrieval system
