Sphingobacterium siyangense: JVX97_00400
Help
Entry
JVX97_00400 CDS
T08059
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JVX97_00400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssiy03021
]
JVX97_00400
03400 DNA repair and recombination proteins [BR:
ssiy03400
]
JVX97_00400
Enzymes [BR:
ssiy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JVX97_00400
Transcription machinery [BR:
ssiy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JVX97_00400
DNA repair and recombination proteins [BR:
ssiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JVX97_00400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QRY57976
LinkDB
All DBs
Position
complement(81315..82307)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQRPDKVIMQKSTDFDGTFEFRPLEPGFGVTIGNALRRILLSSLEGYAITSIRFS
GVSHEFSTIKGVVEDVTEIILNLKQIRFKKTGEIGDNEKVFVVINGQEQFLAGDITKFSN
NFTVLNPDMVICNMDNSVTIELELSIAKGRGYVNADENKVVDAPVGVIAIDSIFTPIKNV
KYTIENYRVEQKTDYEKLLLDISTDGSIHPEEALKEAAKILIQHFILFSDENMLLESQTK
EETKVVDEEILHMRKILKTELVDLDLSVRALNCLKAADIRTLAELVTYDVADMLKFRNFG
KKSLSEIQELVKSKGLSFGMNLAKYKLDEE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttagcatttcaaagaccggataaagttatcatgcaaaaatctacggatttt
gatggtacgtttgaatttcgtccattggagcctggttttggtgtaaccattggtaatgct
ttgcgccgtattctattgtcctctttagaaggatatgcaattacgtcgataaggttttct
ggcgtttcgcacgaattttcaacgatcaaaggtgttgttgaagacgtaactgaaattatc
ttgaacttgaaacaaattcgtttcaaaaaaacaggtgagattggtgacaacgaaaaggta
tttgtagtaatcaatggtcaagagcaattcttagctggtgatatcacaaaattctctaat
aactttacggtcttaaacccagacatggtaatctgtaacatggataattcagtgacaatt
gaattggaattgagtattgccaaaggtcgtggatacgtaaatgctgatgagaataaagtt
gttgatgctccagtaggtgttatcgcaatcgattcgatctttactccgatcaagaatgtt
aaatataccattgagaattaccgtgtagagcaaaagactgactacgagaaattgttgttg
gatatctctactgatggctcaattcaccccgaagaagctttgaaagaagctgctaagatc
ttaattcaacactttattttattctctgatgagaatatgcttcttgagtctcaaacgaaa
gaagaaactaaagttgttgatgaagaaatcttacatatgcgtaagatcttgaaaacagaa
ttagtagatcttgatctttcagttcgtgcattgaactgtttgaaagctgcggatattcgc
acattggctgagttagtaacttatgacgtagctgatatgttgaaattcagaaacttcggt
aaaaaatcgttaagtgaaatccaagaattggttaaatcgaaaggtttatcattcggaatg
aacttggcaaaatacaaattagacgaagaataa
DBGET
integrated database retrieval system
