Sphingobacterium siyangense: JVX97_00970
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Entry
JVX97_00970 CDS
T08059
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JVX97_00970 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssiy03019
]
JVX97_00970 (groL)
03110 Chaperones and folding catalysts [BR:
ssiy03110
]
JVX97_00970 (groL)
03029 Mitochondrial biogenesis [BR:
ssiy03029
]
JVX97_00970 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssiy04147
]
JVX97_00970 (groL)
Enzymes [BR:
ssiy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JVX97_00970 (groL)
Messenger RNA biogenesis [BR:
ssiy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JVX97_00970 (groL)
Chaperones and folding catalysts [BR:
ssiy03110
]
Heat shock proteins
HSP60 / Chaperonin
JVX97_00970 (groL)
Mitochondrial biogenesis [BR:
ssiy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JVX97_00970 (groL)
Exosome [BR:
ssiy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JVX97_00970 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JVX97_00970 (groL)
Exosomal proteins of breast cancer cells
JVX97_00970 (groL)
Exosomal proteins of colorectal cancer cells
JVX97_00970 (groL)
Exosomal proteins of bladder cancer cells
JVX97_00970 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QRY58084
LinkDB
All DBs
Position
complement(210226..211863)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKQVKYNVEAREALKKGVDTLANAVKVTLGPKGRNVIIEKKFGAPVITKDGVSVAKEIE
LKDALENMGAQMVKEVASKTADQAGDGTTTATVLAQAIVAPGIKSVAAGANPMDLKRGID
KAVATVVANLKSQSQEVGQDNNKIKQVATISANNDEVIGALIAQAMEKVGNDGVITVEEA
KGTETEVKTVEGMQFDRGYLSPYFVTNSDKMEAELDNPYILIYDKKISNMKELLPILEKQ
VQTGKPLLIIAEDLDGEALATLVVNKIRGSLKVAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFKLENAELSYLGQAEKVQVDKDNTTIINGSGNVEDIKARVAQIRSQIETTTSDY
DREKLQERLAKLSGGVAVLYVGATTEVEMKEKKDRVDDALHATRAAVEEGIIAGGGVAFI
RSTEALVNLKGDNEDEQIGIDIIKRAIEEPLRQICNNAGIEGAVIVQKVKEGTADFGYNA
RTDRYENLIAAGVIDPTKVSRVALENAASVASMLLTTECVLADEAEENPVGAGAPPMGGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaagtaaaatataacgttgaggctcgcgaggcccttaaaaaaggtgtagat
actttagctaatgcagttaaagtaacattgggtcctaaaggacgtaacgtaattattgag
aaaaaatttggtgctccagtaattactaaagatggtgtttcggtagcgaaagaaatcgaa
ttgaaagacgctttagaaaatatgggtgcacaaatggtaaaagaagtagcttccaaaaca
gctgatcaagctggtgacggtactacaactgctactgtattagcgcaagcaatcgttgct
ccaggtatcaaatctgtggcagctggagctaatccaatggatctaaaacgtggtattgac
aaagctgttgcaactgttgttgctaacttgaaatctcaatctcaagaagttggtcaagac
aataataaaattaaacaagttgctactatttcagcgaacaatgacgaagtaattggtgct
ttgattgctcaagcaatggaaaaagtaggtaacgacggtgttatcactgttgaagaggca
aaaggtactgaaacagaagtaaaaactgtggaaggtatgcaatttgaccgtggttattta
tcgccatattttgtgacaaattctgacaaaatggaagcggaattagataacccatacatc
ttgatctacgacaagaaaatcagcaacatgaaagaattgttgcctatcttggagaaacaa
gttcaaactggtaaaccattattgatcattgctgaagacttagatggtgaggcactagca
acattagttgttaataaaatccgtggttcgttgaaagttgcagctgttaaagctccaggt
tttggtgaccgtcgtaaagcaatgttagaagatatcgctatcttaactggtggtactgtt
atctctgaagaaagaggtttcaaattagagaatgctgagttatcttacttgggtcaagct
gaaaaagttcaagttgacaaagataacacaactattatcaatggttctggtaatgtagag
gatatcaaagcacgcgttgctcaaatccgttcacaaatcgaaacaacaacttctgattac
gatcgcgaaaaactacaagaacgtttggcaaaattgtcaggtggtgtagctgtgttatat
gtaggtgcgactactgaggttgaaatgaaagagaaaaaagaccgtgttgatgatgcatta
catgcaactcgtgcagctgttgaagaaggtattatcgctggtggtggtgttgcattcatt
cgctcaactgaagctttggtaaaccttaaaggtgacaacgaagatgagcaaatcggtatt
gacatcattaaacgcgctatcgaagagccattacgtcagatctgtaataacgctggtatc
gaaggtgcagtaatcgttcaaaaagtgaaagaaggaactgcagatttcggttacaacgcg
cgtacagaccgttacgaaaacttaatcgctgctggtgtaattgatccaactaaagtatct
cgtgttgcattggaaaatgcagcttcagttgcttcaatgttattgactacggagtgtgta
ttagctgacgaagctgaagaaaaccctgtaggtgctggtgctcctccaatgggtggcggt
atgggtggaatgatgtaa
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