Sphingobacterium siyangense: JVX97_01000
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Entry
JVX97_01000 CDS
T08059
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssiy03016
]
JVX97_01000 (miaB)
Enzymes [BR:
ssiy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
JVX97_01000 (miaB)
Transfer RNA biogenesis [BR:
ssiy03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
JVX97_01000 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QRY58090
LinkDB
All DBs
Position
complement(215955..217391)
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AA seq
478 aa
AA seq
DB search
MLDLTHTTKEHDESRQGEALLLEQDPTLSNGRKLYIESYGCQMNFSDSEIVASILLDKGF
ETTKNYQEADVVFINTCSIRENAEQRVRNRLKEFEAAKAKNPGMIVGVLGCMAERLKSKF
LEEEKLVDVVVGPDAYRDLPNLIDKVDDGAKAVNVLLSREETYADINPVRLNSNGVTAFI
SIMRGCDNMCSFCVVPFTRGRERSRDPQSIVKEAQDLFNAGYKEVTLLGQNVDSYKYTAP
VAEGEEPGETITFARLLTMVAEISPLLRIRFSTSHPKDITDEVLYAIASHENICNYIHLP
VQSGNSRVLELMNRTYDREWYMERVDAIRRIIPECAISTDVITGFCTETEEEHQETLSMM
DYVKYDFAYMFAYSERPGTLAAKRYADDIPEDVKKRRLTEVINKQRDHSLYRYQHFVGKV
CKVLVEGFSKRSEFDFCGRNDQNALVVFPIDPRFKQGDYVNVLIESCTSATLLGKIVD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgctagatttaacacataccactaaggaacacgacgaatctcgtcagggtgaggcatta
ttattagaacaggatccgacgttaagtaatggacgcaaactgtatattgaaagttacggt
tgccagatgaatttttcggatagtgagattgttgcttctattttgttggataagggattt
gaaacaaccaagaattatcaggaagctgatgtggtttttattaatacctgttcaatccgc
gaaaatgcagaacagcgtgtgcgcaatcgtctaaaggaatttgaagctgctaaagcaaaa
aatcctggaatgatcgttggtgtgctggggtgtatggcggagcgtttgaaatcgaaattc
ttagaggaagagaagttggttgatgtcgttgtagggccagatgcttatcgcgatctacca
aatttgattgataaggttgacgatggagctaaagcggtaaacgttttgttatctagagag
gaaacgtatgccgatattaatcctgtccgtttgaattcaaatggtgtaacagcttttatt
tcgattatgcgtggctgcgacaacatgtgttctttctgtgttgttccttttacacgtgga
cgtgaacgtagccgtgatccacaatctatcgtgaaggaggcccaagatctctttaatgca
ggttataaggaggttacgttgttgggacaaaatgtggattcctacaaatatactgctcca
gtagctgaaggggaggaaccaggtgaaactataacatttgctcgtttgcttacgatggtt
gctgaaatcagcccgcttttacgtattcgcttctctacttcccatccaaaagatattaca
gatgaagttttatatgcaatagcttcgcatgaaaacatctgtaattatattcacttgcca
gttcaatctggaaattcccgtgtattggaattgatgaatcgtacctatgaccgtgaatgg
tatatggaacgtgtggatgccatccgccgtattattcctgaatgtgctatttctaccgat
gttattacaggtttctgtacggaaacagaagaggagcatcaggaaacattatctatgatg
gattatgtcaaatacgatttcgcctatatgtttgcttactcggaaaggccaggtactttg
gctgcaaaaagatacgcagatgatattccagaagatgtaaaaaaacgtcgtttaacagaa
gttatcaataaacagcgcgatcatagcttatatcgttatcagcattttgttggcaaagta
tgtaaagtgcttgttgagggattttcaaaaaggtctgagttcgatttttgcggtcgtaat
gatcaaaatgcattggtggtatttccaatcgatcctcgatttaaacaaggtgattatgtg
aatgtacttatcgagtcatgtacttctgcgacattattgggaaaaattgttgattaa
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