Sphingobacterium siyangense: JVX97_02825
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Entry
JVX97_02825 CDS
T08059
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssiy03009
]
JVX97_02825 (rimO)
Enzymes [BR:
ssiy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JVX97_02825 (rimO)
Ribosome biogenesis [BR:
ssiy03009
]
Prokaryotic type
ribosomal protein modification factors
JVX97_02825 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
DnaT_2
Motif
Other DBs
NCBI-ProteinID:
QRY58426
LinkDB
All DBs
Position
complement(703527..704864)
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AA seq
445 aa
AA seq
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MKTKYAKPAPLINKPRVNVVTLGCSKNIHDSEVLMGQLKGNQMEVVHEASNIQANDIVVI
NTCGFIDNAKQESIDAILQYSDLKDQGKINKVIVTGCLSERYKPELQSEIPNVDAFFGTN
DLPDLLSSIGADYRHELLGERLLTTPSHFSYFKIAEGCNRPCSFCAIPLMRGKHVSKSID
DLVKEAKFLASNGTKELILIAQDLTYYGLDIYGKRNLSDLMRHLSDVDGIEWIRLQYAYP
SGFPMDILDAMNERSNICNYLDMPLQHISDPMLKSMRRGTTKQKQIDLVNAIRDKVPDIA
LRTTLICGYPGETEQDFQEMLDWVEETRFDRLGCFTYSHEEKTHAHSLEDNVPQEVKEER
VEAIMEVQQGISYDINQSKVGNTYKVLVDRVDGDYFIGRTEYDSPEVDNEVLIPAADSYA
RIGDFVQVKIDRAEDFDLYGEIVRK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaaatacgcgaaaccagcgcctttgatcaataaaccacgtgtcaatgtggtg
accttgggctgttcgaaaaatattcacgatagtgaagtcctgatgggccagttaaagggc
aatcagatggaagtcgtgcatgaagcatccaatatacaggcgaatgatatcgtcgtcatc
aatacctgcgggtttattgataatgccaagcaggaatctattgatgcgatcttacaatat
tcggatctaaaagatcagggtaaaatcaataaagtgatcgttacaggttgtctttctgaa
cgatataagccagagctacagtctgaaatccccaatgttgatgcctttttcggtacgaat
gatttgccggatctgttgtcatccattggagctgattatcggcatgaattgttgggcgaa
cgcttattgacaacaccttcgcatttttcttactttaagattgccgaaggatgtaaccgt
ccctgctctttttgtgcaattcccttgatgcgtggtaaacacgtttccaaatccattgat
gatcttgtgaaagaagcaaaatttctcgcgtcgaacggcacgaaagaattgattctgatt
gcacaagacttgacctattatggcttggatatctatggaaagcgcaatctttctgattta
atgcgccatttgtcagatgttgatggtatcgaatggatcagactgcagtatgcctatcct
tcgggtttcccaatggatattttggacgccatgaatgaacgttcaaatatctgtaattac
ttggatatgccattgcaacatatatctgatccgatgttgaagtctatgcgaagaggtaca
acgaaacagaaacagatcgatcttgtcaacgcaatacgtgacaaagttccagatatcgcc
ttgcgtacgacattaatttgtggttatccaggtgaaactgaacaggatttccaggagatg
ttggattgggttgaagagacccgttttgacaggttaggctgttttacctattctcatgaa
gaaaagacgcatgcacattcgctggaggataatgtgccacaggaagtaaaagaagagcgt
gtggaagctatcatggaagtacagcaaggtatttcgtatgatatcaatcagtccaaagtg
ggcaatacgtataaagtattggttgatcgggtagacggcgattactttattggccgcaca
gaatacgattctccagaagtcgacaatgaggtcttgattcctgctgcagattcttatgca
cgtattggtgattttgttcaggtaaaaatcgaccgagctgaagatttcgatttatatggt
gagattgtaaggaaataa
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