Sphingobacterium siyangense: JVX97_03570
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Entry
JVX97_03570 CDS
T08059
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssiy02000
]
JVX97_03570
Transporters [BR:
ssiy02000
]
Other transporters
Pores ion channels [TC:
1
]
JVX97_03570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
Surfac_D-trimer
Motif
Other DBs
NCBI-ProteinID:
QRY58562
LinkDB
All DBs
Position
complement(860270..861643)
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AA seq
457 aa
AA seq
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MNYSTIKKTAVAATLVAALGFAGTAQAQQVFGGRSQYRTWSIGVQGGITTPNNVIGGSNA
FGQKVGYFQNKVGEYYGLTVRKQFSHLFGLEVEANRGKIKTYNHDLSGPATENALGARSV
ETSVNWAASLNGVFQLGTIDFLRRENAVNFYAKVGLGAMAFNPVQFANNDFSGKEVYNGK
GQWGDGIIGDRDPKRDRDNKLTAFVPVGVGAKFKLSEVVALNLGYTMNFTDDQIYGPARQ
NSYKGKFSSVMAGLEFTLGSKDKQNLTFANPVATLYDELKDPSLRNEVEALKQRVSTLEG
TVNTLSADADGDGVSDKFDKCPGTPAGTPVDGSGCPIKFPEPVIETVASNGYYAPIQFEF
DSSVLKTSSYSTLDKLAKELRDNNSAVQLDGYASAEGSDAYNMTLSKDRANSVKQYLVNA
GVSSSSITAKGYGEKNPVASNATEEGRVQNRRVEIKK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaactattctacaattaaaaaaacagctgttgctgctacattagttgccgctttaggt
ttcgctggtacagcacaagctcaacaagtattcggtggtagatcacaatacagaacttgg
tctatcggagttcaaggtggtatcactacaccgaacaacgtaatcggcggatctaacgct
tttggtcaaaaagtaggttacttccaaaataaagtaggtgagtactatggtttaacagtg
cgtaaacaattctctcacttatttggtttagaagttgaagccaaccgtggtaagatcaaa
acttacaaccatgatctttctggtcctgctactgagaacgcattaggagctcgttcagta
gaaacaagtgtaaattgggctgctagcttgaacggtgtattccaattgggtactattgat
ttcttgagaagagaaaatgcagttaacttctacgctaaagtaggtttaggtgcaatggcc
ttcaatcctgttcaatttgctaataacgatttttcaggaaaagaagtatataacggaaaa
ggacaatggggtgacggcattatcggagaccgtgatccaaaacgcgatcgtgacaacaaa
ttgacagcattcgttcctgtaggtgttggtgctaaattcaaattgtctgaagttgttgcc
ttgaatttgggttatacaatgaacttcacagatgatcaaatctacggtccagctcgtcaa
aattcttacaaaggtaaattctcttcagttatggctggtttagaattcactttaggttcg
aaagacaaacaaaacttgacttttgctaaccctgttgcgacattgtacgatgagttgaaa
gatccttcattgagaaacgaagttgaagcattgaaacaacgtgtaagcactttagaaggt
acagttaacactttaagcgctgacgctgatggcgacggtgtatctgataaatttgacaaa
tgtcctggtactccagctggtactccagtagatggttcaggatgtccaatcaaattccca
gagccagttattgaaactgtagcttctaacggttactacgctccaattcaattcgaattt
gatagctcagtattgaaaacttcatcatactctacattagacaaattggctaaagagtta
cgtgataacaattcagcggtacaattagatggttatgcatctgcagaaggttctgatgct
tataacatgactttatctaaagaccgtgctaactctgtaaaacaatatttagtaaatgct
ggtgtttcttcatcaagcatcacagctaaaggttacggagagaaaaatccagttgcatct
aatgctactgaagaaggtcgcgttcaaaaccgtcgtgttgagatcaaaaaataa
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