Sphingobacterium siyangense: JVX97_03990
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Entry
JVX97_03990 CDS
T08059
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssiy03016
]
JVX97_03990 (truA)
Enzymes [BR:
ssiy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JVX97_03990 (truA)
Transfer RNA biogenesis [BR:
ssiy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JVX97_03990 (truA)
Prokaryotic type
JVX97_03990 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QRY58640
LinkDB
All DBs
Position
966047..966802
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AA seq
251 aa
AA seq
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MDKRRFFLEIAYFGQAYHGWQIQNNAISVQEVLNKALETLLREPIETTGAGRTDTGVHAK
QLYAHFDAAPVGILQKADRFIHSLNALLPFDVAVKRLIEVEPEAHARFDATQRSYEYHLH
FHKDPFIYPYSCFMRDRPDVEKMNEAAQFLLGKQDFECFSKSHTQVFTNICDIRRAEWVW
HTEQHLVFHITADRFLRNMVRAIVGTSLEIGIKGKPISFMQDVIQSKNRGKAGVSVPAHG
LYLTEVAYPYI
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagacgtttttttttagaaatagcctattttggacaggcttatcatggttgg
caaattcagaataatgcaatttccgttcaggaagtgctgaataaagcgcttgaaaccctg
ttgcgggagcccattgaaacaactggagctggccgtacagatacgggtgttcatgccaag
cagttgtatgcacatttcgatgctgcccccgtgggtattctacaaaaagctgatcgtttt
attcattcgctcaatgctttattgccctttgatgtggccgtgaagcgcttgatcgaagtg
gaacccgaagcacatgctcgcttcgatgcaacgcaaagatcatatgaataccatcttcat
tttcataaagatccttttatctatccctattcatgttttatgcgcgatcgtccggatgtt
gaaaagatgaatgaagctgcacaatttttattgggtaaacaagatttcgaatgctttagt
aagtctcatacgcaggtgtttacaaatatttgcgatattcgtagagctgagtgggtatgg
catactgagcagcatctggtttttcacataactgcagatcgttttttgcgcaatatggtg
cgtgccattgtagggacatcattggaaatagggataaaaggtaagccgatttcatttatg
caagatgttattcaaagtaaaaaccgcggaaaagcgggtgtttctgttcctgcacatggt
ttatatttaacagaagtagcatatccttatatatag
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