Sphingobacterium siyangense: JVX97_06485
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Entry
JVX97_06485 CDS
T08059
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssiy03009
]
JVX97_06485
Enzymes [BR:
ssiy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
JVX97_06485
Ribosome biogenesis [BR:
ssiy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JVX97_06485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QRY59092
LinkDB
All DBs
Position
complement(1596466..1598082)
Genome browser
AA seq
538 aa
AA seq
DB search
MPFSNKRNSRDDNSRKSRGNSDSFKSRGDKNNSFGKKSYGSNDQSERGSFRKDDNRENRS
FGSKKFSDKPPFRGENNSFRSKDNSEKSFGRGGRSFDKNDSSRSFDKKDSFNKFDRSERS
FDKKDNFKRSDRNDSSRSFDRSERSFDKRDSFKRSDRNDSSRSLDRSERSFDKRDSFKRT
DRNDSSRSFDRSERSFDKRDSFKRSDRNDTPRSFDRSERSFDKKDNFKRSDRNDSPRSFD
RSERSFDKRDNFKRSDRNDSSRPSNRKFDGERSRNFDDNKNFGDKQYIKRPKKKAEDAED
DGLVRLNRYIANAGICSRRKADELIIAGVIWVNGEPVTELGTKVDPATDEIRYNNERLKR
EKNVYVLLNKPKDYITTTDDPQERHTVMELVSKATKERIYPVGRLDRNTTGLLLMTNDGS
LAEKLSHPRNSISKIYNVELNKSLTQGDFNKISFGIELEDGVIKPDDLSYVQGGSKREVG
IQIHSGKNRIVRRIFESLGYEVVKLDRVVYANLTKKDLPRGRWRYLEEREIVQLKHLI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgccattcagcaataaaaggaacagtcgtgatgacaactccagaaagtcacgaggcaac
tcagatagcttcaaatctagaggcgataagaacaatagtttcggaaaaaaatcatatggg
tcgaatgaccaatctgaaagaggttctttcagaaaagatgataatcgtgagaacagatca
ttcggatctaaaaaattctcagacaaacctcctttccgaggagagaacaattccttccgt
tcaaaagataattcagaaaaatcctttggtagaggaggccgctcatttgataaaaatgat
tcttcaagatcttttgacaaaaaagattccttcaataaatttgatagatcagaacgttct
tttgacaaaaaagataacttcaaacgttccgatagaaatgactcttcaagatcttttgac
cgttcagaacgttcttttgataaaagagatagtttcaaacgttccgatagaaatgattcc
tcaagatctcttgaccgttcagagcgttcttttgataagagagatagtttcaaacgtaca
gacagaaatgattcctcaagatcttttgatagatcagaacgttcttttgacaaaagagat
agtttcaaacgttcagacagaaatgacactccaagatcttttgaccgttcagagcgttct
ttcgataaaaaagataacttcaaacgttcagacagaaatgacagcccaagatcatttgat
agatcagagcgttcttttgataaaagagataatttcaaacgttcagacagaaatgactct
tcaagaccttctaacagaaagtttgatggcgaaagaagtagaaattttgatgacaacaaa
aactttggtgataaacaatatattaaacgtccaaagaaaaaagcagaggatgcagaggat
gatggcttagttcgtttaaaccgttacatcgccaatgctggtatttgttcaagacgtaaa
gctgatgagcttatcattgctggtgttatttgggtaaatggagaacctgttactgaattg
ggtaccaaggtagatcctgcaacagatgaaatccgttacaacaacgaacgtttaaaacgt
gaaaaaaatgtttatgttctgttgaacaaaccaaaagattatatcacgactacagatgat
cctcaggagcgtcataccgtaatggaacttgtttctaaagcgacaaaagaaagaatctat
cctgttggtcgtcttgacagaaacacgacgggacttcttttaatgacaaatgatggtagt
cttgctgaaaaactttcacacccgcgtaacagcatcagcaaaatctataatgtcgagtta
aacaaaagccttacacaaggtgattttaacaaaatcagctttggtatcgaattagaagat
ggtgtaatcaaacccgatgacttgagctatgtccaaggtggatcaaaacgtgaagttggc
atccaaatccactcaggaaaaaatcgtatcgtacgtcgtatttttgagtcattaggatat
gaagtcgttaaattggaccgtgtggtttatgcaaacttaacgaaaaaagatcttccacgt
ggccgctggagatatttagaggagcgtgaaatcgtgcaattaaagcacctgatttaa
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