Sphingobacterium siyangense: JVX97_06820
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Entry
JVX97_06820 CDS
T08059
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssiy01011
]
JVX97_06820
Enzymes [BR:
ssiy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JVX97_06820
Peptidoglycan biosynthesis and degradation proteins [BR:
ssiy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JVX97_06820
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
LysM1_NFP_LYK
HTH_10
DUF3287
UPF0193
Motif
Other DBs
NCBI-ProteinID:
QRY59151
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All DBs
Position
1667640..1669106
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AA seq
488 aa
AA seq
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MIGKQTLISILGGVCYVLPLMAQESAVEGMKEATHTFFQKSIEKEKQEIYQYLDSIKSSG
NNRQHDAEITDEDIQLVRKLKAIEREIPLDYSPRVKDLVAKYTSDNYNPYMCRMMGLGQY
YFPLFDKIMDEVGVPRELKYLSVVESSLNPRDISSAGATGLWQLMYYEAKTYHLTVDSYT
DQRMDPIASSYAIAKILKEAYDEYGDWLLAIASYNGGKGAVSRAIQRSGKENATFWDIAP
YLTQQTQNYIPKFIAMTYAMKYADENDINAADTELSLRTQALDINKRISLNQIADALHVS
KETLRALNPSFKRNVLNGTEESPLRLVLPVLDKKIASEELYAALNTPISSATLSQTENLS
EPLQNGKYKVKVGETFASIAEKFEVTVQDIKSWNNLRGNQIVPGQNLLIKKEDDFVNAKL
ARNTERSSKKNQQHAASATRTAYYVVKKGDTLSDIADKNGTSVGRLKSENDLNGSRIKPG
MKLKVSKK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatcggaaaacagacgttaatttcaatactaggaggggtatgctatgtactaccactc
atggcccaagaaagcgctgtagaaggcatgaaagaagccacccataccttttttcaaaaa
agtatcgaaaaagaaaaacaagagatttaccaataccttgatagtataaaatcttccgga
aataacaggcagcatgatgctgaaattacagatgaagatatacagctcgtgcggaaactg
aaagcaatagaacgtgagattccattggactactcaccgcgagtgaaagatctggttgct
aaatatacgtcggataattataacccttatatgtgtaggatgatgggactagggcaatac
tatttcccattgtttgataaaatcatggatgaagttggagtgccgcgggaactcaaatat
ctaagtgtagtcgaatcatcattaaatccacgcgatatctccagtgccggagcaacaggc
ttatggcaattgatgtattatgaagccaaaacttatcatcttacagtggacagttatacc
gaccaacgtatggatccgattgcttctagttatgctatcgcaaaaatcttaaaagaagct
tacgatgaatatggagattggctattagcgatagcatcctataatggtggtaaaggagcg
gttagccgtgcgatccaacgttccggaaaagagaatgctactttttgggatatcgcacca
tatctaacgcaacagacccaaaactatatccctaagttcatcgcaatgacatatgcgatg
aaatacgcggacgaaaatgatatcaatgctgcggatactgaactttcactaagaactcaa
gcattagatatcaataaacggatttcattgaaccaaatagcggatgctttacatgtgtca
aaagagacattacgtgcattgaatcctagttttaaaagaaatgtattaaatggtactgaa
gagtctccattgcgattggtgttacctgtcttggataaaaagattgcctcagaagaattg
tatgcagctctcaacacaccaatatcttccgcaactcttagtcagacggaaaatttgagt
gaacctttacaaaatggcaaatataaagtgaaagttggtgagacattcgcttccattgct
gagaagtttgaagtaacagtacaggatataaaatcgtggaataacctgcgcggcaatcaa
attgtccctggacaaaacttactgataaaaaaggaggatgatttcgtaaacgcgaaatta
gctcgtaatacagaaagatcttcaaagaagaatcaacagcatgccgctagcgctacacgt
acagcttactatgtcgtgaagaaaggcgatactttatctgatatcgcagataaaaatggt
acatcagtcggtcgacttaaaagtgaaaatgatttaaacggaagccggataaaaccgggg
atgaaattgaaagtctcaaagaaataa
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