Sphingobacterium siyangense: JVX97_08120
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Entry
JVX97_08120 CDS
T08059
Name
(GenBank) DEAD/DEAH box helicase
Organism
ssiy
Sphingobacterium siyangense
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QRY59388
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All DBs
Position
complement(1959550..1962867)
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AA seq
1105 aa
AA seq
DB search
MDFHQYTLTDINFTKVSRYSYFPWMDLTLAHFQVNAMEMEVNQATFQVLENYTDFEVMII
HTLPTTAVFCNCPQTGFCRHQKAALGKLFTQENWLAFFDHNRYQHLLKKVAAQYGLEKEP
SLENYFAAQIKAGKLEFLLKDKQLTSIDDFDLVEESLAPKKVKTTAEQHHHFVVLTRNRY
YKNLQILLCQAPMTKSGLPKNPISASESQSRIWQSSSIEEMQFYTAVYQFSQAMQQDIEI
SSSLKAVAKNPLHLDFYLHDYEKSDNITASTLSPVQFNLNKGDIKLFISKKGAFYTIQGE
IHIHTIAYNLQDLVVLLDHFILIKNQLFLIENRFHLKLIRLFGNKGEQLLIHQRKFEEFN
RLFLEQIAHSVELNFKDIPKASKPQLKENLYYQDMQPLLFLEESEDFVNLIPVMRYGEVE
IPILSKRNIFGTDSKGTQFLVDRKREAETKVISLLLKQHPYFQEQMDEGSFQHFYLHRKY
FLDSNWFLDAFEEWQHQGIQIIGFNTLRGNKLSRFKGKIHVEVLSGQNWFNANIQVKFGP
KSVSLKKLEKAVRNRSQFITLDDGTQGILPQQWLDKFEAYFNAAESIADDFIEIPKYKFN
EIDHLFDQAELDPIVLAELSMLRKQLANFSSLSEVQVPPTFVGNLRPYQQQGLQWLHFLD
GLNFGGCLADDMGLGKTIQILAFLATQKAKGQSAPTLLVLPTTLIFNWRHEIQQFLPSFQ
TLVLDGPNRIERGMQFEQYDLVLISYHNLLTDINTLKKITFNYVILDESQQIKNPDSQRY
KTVNLLKSRNRIILTGTPIENNTMDLYAQLSFIVPGLLGSKKYFKDVYTTPIDAFHDRKR
KKMLKEKIKPFILRRTKQDVLRDLPAKNELVLYCEMKTAQRRIYDLYEKEFRDFISAKDG
DEIKKSPMHVLKGLTKLRQICNSSKLLQNEDLTSAADSAKIEMLIEQIQHKKDQHKMIVF
SQFVSMLNLIKEALDKQGIRALMLTGQSKNRGKLVSDFQSDKDIPVFLVSLKAGGTGLNL
TAADVVYLVDPWWNPAVEQQAIDRIYRMGQQKTVTAVRLISPNTVEDKIQTLQQHKKEIS
NSILDDGGSLDVFYLDKSYLMNLLR
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggacttccatcagtatacattgaccgatatcaatttcaccaaggtgagccgttattct
tattttccttggatggacctgacattggcccattttcaggttaatgcgatggaaatggag
gtcaatcaggcaacttttcaggtactggagaattataccgattttgaagtgatgatcatc
catacattgcccacaacagccgttttttgcaattgtccacaaacaggattctgccgtcat
caaaaggcggctttaggtaaactatttacacaggagaattggctggctttttttgatcac
aaccgctatcagcatctcctcaagaaggttgcggcacaatatggactggaaaaggaaccg
tctttagaaaactattttgctgcgcagatcaaagcagggaagctggagtttctgttaaaa
gacaaacagctaacctccattgatgactttgatctagtagaggaatctcttgccccaaaa
aaggtcaagacgacagccgaacagcatcatcattttgtggtgttaacgcgcaaccggtat
tacaaaaatctacaaatactcctgtgtcaagctccaatgacgaaatccggcctacctaaa
aacccgatttccgccagtgagagccagtcacgtatctggcaaagcagctcgattgaggaa
atgcaattttacaccgctgtttaccaattttctcaagctatgcaacaggatatcgaaatc
agctccagtctgaaggcggttgcaaaaaacccattacacctcgatttttatctgcatgac
tatgaaaaatccgacaatataacagcctccaccttatcgccggttcaatttaacctaaac
aaaggtgatattaagctctttatttcaaaaaaaggtgcattttataccattcaaggagaa
attcatattcatacgatagcctacaatttacaggatttagtcgttcttttggaccatttc
attctcatcaaaaatcagctttttctgattgaaaataggtttcacctcaagttgatccgt
ttgtttggcaacaaaggtgagcaattgttgatccatcagcgtaagttcgaagaattcaac
aggttgtttttggaacagatagcacattccgtggagttaaattttaaagatattcccaaa
gcaagcaagccacagttgaaggaaaatctgtattatcaggacatgcagcctcttttgttt
ctggaagaatcggaagattttgtcaaccttattcctgtcatgcgttatggtgaggtcgaa
attcctattttaagtaagcggaatatatttggtacagacagcaagggtacacaatttttg
gtcgatcggaaacgtgaagctgaaacaaaagttatttccctgctactgaagcagcatccc
tattttcaggagcaaatggatgagggaagctttcagcatttttatttgcatcgcaaatac
tttctggatagcaactggttcctggatgcttttgaggagtggcagcatcagggtatacag
atcatcggatttaatacgttacgtggaaataaattaagccggtttaaaggtaaaatacat
gtggaggtcctcagtggacaaaattggttcaatgccaatatacaggtcaaatttggcccc
aaaagtgtctccctaaaaaaacttgaaaaggcagtacggaaccgctcgcaatttatcacc
ttggatgacggcacccagggcattttaccgcaacagtggctcgataaatttgaggcctat
tttaatgcagcagaatcgatagctgatgatttcattgaaattccaaaatacaaattcaat
gagatcgatcacctgtttgatcaggctgagctagaccctatcgtgttggcggagctcagc
atgttgagaaagcagctcgctaatttttcttcgctatccgaggtccaggtaccaccaact
tttgtcggaaacttacgcccctatcagcaacaaggactacaatggctgcatttcttggat
gggcttaattttggtggctgtcttgccgatgacatgggacttggcaaaacgatccaaata
ttagcctttctggctactcaaaaagcaaagggacaatctgcaccaacattacttgtactt
cccacgaccttaatttttaattggcggcatgaaatacaacaatttcttccatcttttcaa
acgttggttttagatggtccaaatagaatagaaagagggatgcagtttgaacaatatgac
cttgttttaatttcttatcacaacctgctgacggatattaatacgctaaaaaaaataacc
ttcaattatgtcatattggacgaatcgcagcaaatcaaaaacccggattcccagcgatac
aaaacggtaaatttattaaaatcaagaaatcgcattattttaacaggaactcctatcgag
aataatacgatggatctttatgcccagctttcctttattgtgccgggtctactaggaagc
aaaaaatatttcaaagatgtctatacgactcctattgatgctttccatgaccgcaagaga
aaaaaaatgctaaaagagaaaataaagcctttcattctccgtagaacaaaacaggatgta
ttacgtgatcttcctgcaaaaaatgaactggtcctttactgtgagatgaaaactgcccaa
cggcgaatttatgatctttatgaaaaagagtttcgggattttatctctgccaaagatggc
gatgaaatcaagaaaagccccatgcatgtcctaaaaggtctaacaaaattgcgtcagata
tgtaattcaagcaaactgctccaaaacgaagatctgactagcgctgcggactctgccaaa
atagaaatgcttatcgagcagattcagcataaaaaagaccagcacaaaatgatcgtgttt
tcacagtttgtcagtatgctcaacctgattaaagaggctttggataaacagggtattcgc
gcgttaatgctcacaggccaatccaaaaatcgaggtaaattggttagtgattttcaatcc
gacaaggatatccccgtttttctggttagcctaaaagccggtggtaccggacttaatctt
accgcggccgatgtcgtgtacctggtagacccctggtggaatcctgctgttgaacaacag
gcgatcgacaggatctatcgcatggggcaacaaaaaacggtcaccgcagtccgattaatc
agccctaacacggtcgaagataaaattcaaacattacagcaacataaaaaggagattagc
aacagtattctggatgacggcggaagtttagatgtcttttatctcgacaaaagctattta
atgaatttgctacgctaa
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