Sphingobacterium siyangense: JVX97_10790
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Entry
JVX97_10790 CDS
T08059
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssiy02000
]
JVX97_10790
Transporters [BR:
ssiy02000
]
Other transporters
Pores ion channels [TC:
1
]
JVX97_10790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
FecR_C
CarboxypepD_reg
STN
CooC_C
Motif
Other DBs
NCBI-ProteinID:
QRY60659
LinkDB
All DBs
Position
2608612..2611803
Genome browser
AA seq
1063 aa
AA seq
DB search
MHVGAMTYAQKVSLSMKNAKLSTVLKDLQKKSGVNIFFNESIFSEDKLVNVNYRNVPFND
VLEDICKRYKIDYKRVDNNIVLNRTTVALSKTEDIRMNIQKRQITGIVKSVDGKGLAAVT
VTEKGMGNKTSTQADGSFRIEVQSQKPVLQFTIVGYQAKDVAVNNNNVLTVQLDTVINAM
DEVVVVGYGKQTKQDLTGSVNQLDEKSFRQGAVISADNLIQGKVPGVRVVGNSGEPGGGV
DVTIRGVGSIRSGSTPLFVVDGVPLSNENVSPGGQDIGFGSSRPKNPLNFLNTSDIESIT
VLKDASAAAIYGARGSNGVVIITTKKGKKGEANLTADSYLGFSSVAHKVDVMSAEQYRSA
IKDKAFDHGSNTDWQDVVYRTAKTRNNSLSFSKASSTGNYYVSAAQMDQQGIVQNSDFRR
TSARVNASESFLDDKRLTVGFNLTASETKDIGVPTSDNTGAFGQLITHTLMANPTRSVFD
DKGNFTNFNMNAHYNPMYLLDIYRDNTRTLRALGNLDISFRIIDGLVYKFNLGIDRAMGE
RNTTIFPNITDLNPRGRFMKYNQNSKNTLLEHYLNYSKLIYKHKIEALAGFSYQKFDNGG
NGYTIDGIANKGEGVLPENNPGYAGRPTTATGFSQVNELQSYFTRVNYSYDNRYLLTASL
RADGSTRFGKNNKYGYFPSFALGWNIAKENFLKETNWLNDLKFRASWGNTGNQEVQNKIT
KASYSLAAGNGYYMNDDLALVNGVSVNRTPNPNLKWEVVTQTNFGVDFDLWKGKLYGTLE
YYNKTTTDAILNIPSQVLSPTADIWVNIDGKLVNKGFEFLLGSKLINKEGFSWTVDVNGA
TLQNKIEDLPVSEILSGAIAGPGQSGVNVNIYKSGYAAGSFYLWDYEGVDDKGNYQYSDQ
RRIIEGALPKFTYGLNSQMYYKAFDFSFSFIGQLGGYNFNNMAMNALNINNLASDRNVSN
RYYAPNISPSNNPQISTLYLEKSDFIRLNSVRLGYTIPLVSKKWVQSVGLYVTGQNLWTV
TKYSGYDPLINSPRVSNGNQSLGVDYTAYPSAKTFLFGATIKF
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcggagcgatgacttacgcgcaaaaggtaagtttatccatgaaaaatgccaaa
ctatctaccgttctcaaagacctacagaagaaaagtggtgttaatattttctttaacgag
tccatcttttcggaagataagcttgtcaatgtaaattatagaaatgtaccatttaacgat
gtattggaagacatctgtaagcgatacaagatcgattacaagcgtgtagataataatatt
gtattgaatcgcaccacggttgccttgtcgaaaacagaagacattcggatgaatattcag
aaacggcagatcacagggatagtcaaatcagtagacggtaaggggcttgctgctgtaacg
gtaacagaaaaaggaatgggcaataagaccagtacccaagcggatggtagcttccgaatt
gaggtacaaagccaaaagcctgttcttcagtttacgatcgtaggttatcaggctaaagat
gtcgctgtcaataataacaatgtattgactgttcaattggatacggttatcaatgcaatg
gatgaggttgtcgttgtgggatatggaaagcagacgaagcaggatctaacaggttctgtc
aatcagttggatgaaaagagtttcagacaaggtgcggtcatctcggccgataatctaatt
caaggtaaagttcccggcgtgcgtgtagtagggaacagcggcgagccaggtggtggcgtg
gatgttacgattagaggggtaggttctatccgcagtggcagtacaccgctatttgttgtt
gatggagtacccttgagcaatgaaaatgtgagccctggtggccaggatatcggttttggt
tcaagtagacctaaaaatccactgaattttctgaatacaagcgatatcgaatccattacg
gttcttaaagatgcttcagcagcggcaatctacggggcgagaggttctaacggcgtggtg
atcattacgacaaaaaaagggaagaagggggaggccaatctgacggctgattcatacttg
ggattttcttcggtggcgcataaagtagatgtgatgtctgccgaacaatatcgcagtgca
ataaaagataaggcctttgatcacggtagtaacaccgattggcaggatgtggtctatcgc
acggcaaaaacaaggaacaattccctctccttttcaaaagcaagtagtacaggtaattat
tatgtgtctgccgcacaaatggaccagcaggggattgtgcagaacagtgattttagacga
acttctgctcgtgttaatgcttccgaatcgtttttggatgataaaaggcttacagttgga
tttaaccttacagctagtgaaaccaaagatattggtgtgccgacaagtgacaatacgggg
gcatttggccaattgattacacacaccttgatggcaaatcctacccgttcggtatttgat
gacaaagggaattttacaaattttaatatgaatgcgcattacaacccgatgtatctgttg
gatatctatcgggataatacgcggacactgcgtgcattaggtaatttggatatttctttt
cgcattatcgatgggctggtatacaagttcaatttgggaattgaccgcgccatgggtgaa
cggaatacaactattttccccaatattaccgacctcaatccccgaggaagattcatgaaa
tataatcagaattcgaaaaataccctgctcgagcattacctgaattatagtaaattgatc
tataaacataaaattgaagctttagcgggattttcctatcagaaatttgataatggagga
aatggttataccattgatggcatcgcaaataagggggaaggcgtacttccggaaaataat
ccgggctacgctggacgtccaacaacagcaacaggtttttctcaggtgaatgaactgcag
tcctattttacacgtgtcaactacagttatgacaatcgttacctgttgacagcttccttg
cgtgccgatggatctacccgattcggaaagaataacaaatatggttatttcccttcattt
gccttgggctggaatatcgctaaggaaaactttctgaaagagaccaattggctaaatgac
ttgaaattcagggccagttgggggaatacgggtaatcaagaagttcaaaataaaatcacc
aaagcgagttactccttggcagctggcaatggctactacatgaatgacgatcttgcactg
gtcaacggcgtatctgtcaatcgtacacccaatccaaatttaaaatgggaggttgtgacg
caaacaaacttcggtgttgattttgatttgtggaaaggtaaattgtacggaacattggaa
tactacaataaaaccaccacggatgcaatattaaatattccttcgcaggtattgagccct
acggccgatatatgggtcaatatcgatggtaaattggtgaataaaggatttgaattttta
ctcggatcaaagttgatcaataaggaagggtttagctggacagtggatgtcaatggtgcg
acactgcaaaataaaatcgaagatttgcctgtatccgaaattctttctggcgctattgcg
gggccagggcaatctggtgtgaacgtcaatatttataagagcggatatgctgccggctcc
ttttatttatgggattatgaaggagtagatgataaaggtaattaccaatatagtgaccaa
cgtcgaattatcgaaggggctttacccaaatttacctacggtttgaatagccaaatgtac
tataaggcatttgatttttctttttcatttatcggacagttgggcggttataattttaat
aatatggcgatgaatgccttgaatattaataatctggcatcggatagaaacgtgtccaat
aggtattatgcgcccaatatcagtccttccaataacccgcagatttcaacgctttacctt
gaaaagtctgattttattcgtcttaattctgttcgtttaggctatacgatacctttggtc
agcaagaaatgggttcaatctgtcggattgtacgtaacgggacaaaacctatggacggta
acgaaatattcgggatatgatccgttgatcaacagtccccgtgtaagtaacggcaaccag
tcgctgggggttgattatacggcctatccttcggcaaagacatttttatttggtgcaacg
attaaattttag
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