Sphingobacterium siyangense: JVX97_13135
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Entry
JVX97_13135 CDS
T08059
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssiy03400
]
JVX97_13135
Enzymes [BR:
ssiy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JVX97_13135
DNA repair and recombination proteins [BR:
ssiy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JVX97_13135
Prokaryotic type
JVX97_13135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QRY60331
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Position
3149682..3150980
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AA seq
432 aa
AA seq
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MEKDKIIVFWFRRDLRLDDNAGLTRALASGYPVLPIFIFDEDILMQLEDRRDRRLHYIHQ
ALTRINTLLGESGATLNTFYGKPIAIYKELIEKFDVQGIYCNRDYEPKAIRRDKEIFELC
TARGIPFKAVKDQVIFDKGDILKNDGTPYTVYSPYAKKWREKLRPEDHLSSTYTTGSFFQ
QNHQQIISLVNLGFLETDLIFEEPQLNAAIIDNYDTTRDYPALMGTTKLGIALRFGTISV
RQCVTFALKHNATWLSELIWREFFMQILYHYPHVVTESFRKQYDAIQWRNDEVEFQQWCN
GETGYPMVDAGMRQLNSSGYMHNRVRMVVASFLCKHLLIDWRWGEAYFAQKLNDYDMSAN
NGNWQWAAGSGCDAAPYFRVFNPTLQAEKFDKNQEYIKQWVPELDTLDYCKPIVDHQFAR
DRAIKTYAKALK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagataaaattattgtattttggtttcgtcgggatctacgtctggatgataat
gctgggcttactcgcgccttagcttcgggctatcctgtattgcctatattcatatttgac
gaggatattctaatgcaattggaggataggagggatcgacgtcttcattacatccatcaa
gctttaacccgtatcaataccctactcggggaaagtggtgcaactttgaatacgttctac
ggtaaacccatcgctatctacaaggagttgattgaaaaattcgatgtgcagggaatctat
tgtaatcgggattatgaaccgaaagcaattcgtcgggacaaagaaattttcgagctttgt
acagctaggggaattcccttcaaagctgtgaaagatcaggtgattttcgataaaggagat
attttaaagaatgatggaacaccctatacggtttattcgccgtatgcaaagaaatggcgg
gaaaaattacgtcctgaggaccatctttcctctacctacacaacgggatctttctttcaa
caaaaccatcagcagattatttctttggtgaatttagggtttctagagacagaccttatt
tttgaagaaccacagctgaatgcggcgattattgacaactatgataccacccgcgattat
ccggcattaatgggcacaaccaaattggggatcgcacttcgttttggaacaatcagtgtt
cgtcaatgtgttacttttgctttaaaacacaatgcgacctggttgtctgaattgatctgg
cgtgaattttttatgcagatactctaccactatccgcatgttgttacggagtcctttaga
aagcaatacgatgccatacaatggcgcaacgacgaagtagaattccagcaatggtgcaac
ggagagaccggatatcctatggtcgatgcgggtatgcgccaattgaatagttcgggttat
atgcacaatcgcgtacgaatggtcgtagccagttttctttgtaagcaccttttgatcgac
tggagatggggggaggcctactttgcacaaaaactaaatgattatgacatgtcggccaac
aatggtaactggcaatgggccgccggcagtggttgtgacgcagccccgtattttagggtt
tttaatccgacgcttcaggctgagaagttcgataaaaatcaggaatatataaaacaatgg
gttcctgaattagacactttagactattgtaagcctattgttgaccatcagtttgcccgt
gatcgtgcgataaagacctacgcaaaggcgttgaaataa
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