Sphingobacterium siyangense: JVX97_13305
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Entry
JVX97_13305 CDS
T08059
Name
(GenBank) 3-hydroxybutyryl-CoA epimerase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy00071
Fatty acid degradation
ssiy00280
Valine, leucine and isoleucine degradation
ssiy00310
Lysine degradation
ssiy00362
Benzoate degradation
ssiy00380
Tryptophan metabolism
ssiy00410
beta-Alanine metabolism
ssiy00640
Propanoate metabolism
ssiy00650
Butanoate metabolism
ssiy00907
Pinene, camphor and geraniol degradation
ssiy00930
Caprolactam degradation
ssiy01100
Metabolic pathways
ssiy01110
Biosynthesis of secondary metabolites
ssiy01120
Microbial metabolism in diverse environments
ssiy01200
Carbon metabolism
ssiy01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JVX97_13305
00650 Butanoate metabolism
JVX97_13305
09103 Lipid metabolism
00071 Fatty acid degradation
JVX97_13305
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JVX97_13305
00310 Lysine degradation
JVX97_13305
00380 Tryptophan metabolism
JVX97_13305
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JVX97_13305
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JVX97_13305
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JVX97_13305
00930 Caprolactam degradation
JVX97_13305
Enzymes [BR:
ssiy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JVX97_13305
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JVX97_13305
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JVX97_13305
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
DAO
2-Hacid_dh_C
F420_oxidored
GIDA
RS_preATP-grasp-like
YqbF
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
QRY60360
LinkDB
All DBs
Position
complement(3204308..3206419)
Genome browser
AA seq
703 aa
AA seq
DB search
MDENKSYMTHTLFRVEQDNHHIITIHPISTAAPEQLDIIDYLTQFVDLVTFMLEREDTIG
VVYSCPIQDKKIEYTQLFEQFSSSRSRPSDLYKLTSKVLHWETFKKPIVSLISDNCTAIA
LATMLWSNCRIASEKLQFGFPESKYGLFTAFGTTIYLPALIGTENTLNLLTQSKLLSSEE
AHKLGLINELTQKPSDSLSLAINWILNLPNTNAGHHTEQTDELKPEAILTIQKKARGLYP
GTNAVIELLRKKPSSTAIEASEREVNLYLEVLNSPEPLSMVRTLHYGVQLAKSSNRIKHL
GDYSLKKIGILGAGMMGSGIAYEAARAGIEVALKDVTLPQAERGKAYSSQVCEKSLALGA
MSPSQREQLLARIKPTDQVDDLNGSDCIIEAVFEDFHLKAEVTKESLPYLNENGFFATNT
TSLPITELAKATNDPKKFIGMHFFSPVDRMPLVEIICGKQTEQKTLEKALITALRLNKIP
IVVQDGPGFFTSRIFFNYLLEGITMVLEGISPTLVEEEAMAAGFAVGPLAVLDEISLELM
LHVYDQLPGLHASQKRAYTYLKGMVDQERKGKKSGAGFYDYDVETKKKTIWKNPVIASAK
ENVTPSIIRKRLLHVMALDSYRCLAEGVLNQPIDGDIGSILGVGYASYTGGVFGHIDRTT
LPTFIAECEDFQAKGEQWDIPESLRELAKKNFRFYSGFDSNWR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaataaatcttatatgacccacacgctctttcgtgtagaacaggataatcat
cacatcattacaatccatcctatatcgacagcagctcccgagcagttggatattattgac
tatctcacgcaatttgttgatttggttacgttcatgctcgaacgggaagataccataggt
gtcgtatacagctgcccgattcaagacaaaaaaatcgaatatacgcaattatttgagcag
ttttcttcaagccgctcaagaccttcggacttatacaagcttacatcaaaagtattgcat
tgggaaacgtttaaaaaacccattgtatctcttatttcggacaattgtacagctattgcc
ctagcgactatgctatggtctaattgtcgtatcgcctccgaaaaacttcagtttggcttt
ccggagagtaagtatggtttgtttacagcttttggtacaacgatctatttaccagcattg
ataggtactgaaaataccctaaatctgctgacacaaagcaaacttctgagcagtgaagaa
gcgcataaacttgggttaataaatgaattgacgcagaagccaagcgacagcctatcatta
gcaataaactggatacttaatctacccaacaccaatgctggccatcacacggaacaaact
gacgaactgaagcctgaagcaattcttactatccaaaaaaaagcacgcggtttgtaccct
ggcacaaacgcagttattgaattactaagaaaaaaaccgtcatctacagcgattgaagct
agtgagagagaagtaaatttatacctggaagtgttaaatagccccgaaccactcagcatg
gtccgtacacttcattatggtgtccaattggcaaaatcatccaatagaataaaacatctt
ggggactatagcctaaaaaaaataggcatactgggcgctgggatgatgggctcggggatt
gcttatgaggccgccagggcaggaatagaagttgctttaaaagacgttacacttccccaa
gccgaacggggcaaagcctattctagccaggtttgtgaaaaatcattggctttaggagcc
atgagcccatcacaacgggagcaattgcttgcacgcataaaaccaactgaccaagtcgat
gaccttaatggatctgactgcattatagaagctgtatttgaagatttccacctaaaggct
gaggttacaaaagaaagcctaccctatttaaacgaaaatggctttttcgctacaaatacc
acttcattgcctattactgagcttgctaaagcaaccaatgatcctaaaaaatttatagga
atgcatttcttttcgcctgttgaccgcatgccccttgtcgaaatcatctgcggtaaacaa
accgagcaaaaaaccttagagaaagcacttatcacagctttacgcctcaataaaattcca
atagtcgtgcaggatggtccgggttttttcacctcacgtattttcttcaattatttactc
gaaggtattacaatggtactggaaggcatctcaccgacactggtcgaagaggaagcgatg
gctgcaggatttgccgtgggcccattggcagtattggatgagatatcattggaattgatg
ctacacgtttatgatcaattacccggtctgcatgccagccaaaaacgtgcatatacctac
ctcaaaggaatggtcgatcaggaacgaaaagggaaaaaatcgggcgctggattttacgat
tatgacgttgaaaccaaaaagaaaaccatttggaaaaaccctgtaattgcatctgcaaag
gaaaatgtaacaccttcaattatccggaaacgtttgttgcatgtcatggcattggatagc
tatcgatgtctcgcagaaggcgtactcaaccaacccatcgatggcgatattggttctatt
ttaggtgtagggtatgcatcctatacaggtggagtatttggacatatcgaccgtacaacg
cttcctactttcattgctgaatgcgaagactttcaggccaaaggtgagcaatgggatata
ccagaatctttaagagaactggcaaaaaagaatttcagattttatagcggttttgactca
aattggcgatag
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